Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00507 atgcgaGGGTTTTTTCTGGGATTGCTCTTGTTTGGCCCTCTGCTTTTTGTTCTTGCTTCTGGGTCATCAAGAAATTTGCCCATCATAACTTTTGATGAGGGCTACACACCCTTGTTTGGGGACAATAATTTGGCCATCCATAGGGATGGAAAATCAGTTCATCTTACACTGGATGAGAGAACAGGTTCTGGATTCGTGTCCCATGACATTTACCTTCATGGGTATTTCAGTGCTTCGATTAAGTTGCCCAGTGATTACACTGCTGGAGTTGTTGTAGCGTTCTATATGTCGAATGGTGATGTGTTCCAAAAGAATCATGACGAAATCGACTTTGAGTTTTTGGGAAACATTAGAGGCAAAGACTGGAGGATTCAGACCAATGTTTATGGTAATGGAAGCACCAACGTTGGCAGAGAGGAAAGATATGGTCTCTGGTTCGATCCAGCTGAGGATTTTCACCAGTACAGTATTCTCTGGACAGATTCTAAGATCATATTTTATGTAGATGATGTTCCTATTAGAGAAGTCAAGAGAACAGAAGCTATGGGAGGAGATTTCCCCTCAAAGCCAATGACTTTGTATGCTACAATATGGGATGGATCTAATTGGGCCACCAATGGAGGAAAATATAGAGTGAATTACAAGTATGCACCCTATGTTGCAAAATTCTCCAATCTCATCCTGCATGGTTGCGCTGTGGATCCCATGGACAGTGTGGCCAAGTGTGACAGTTCTGAAGACGTTCCTTCTGGCGTCACGCCAGCCCAAAGAATCAAAATGGAGAACTTCCGGAAGAATCACATGACTTACTCATATTGCTACGACAAGCTCAGATACAAAGTCCCTCCTTCAGAGTGTGTGATCAATCCCAAAGAAGCCCAGAGACTCAGGAAATTCGATCCTGTAACGTTTGGCAATGGCAGACGCCATTCCAAGAGACGCAACCACCGCAGCAGAGGAAGCCAGGCAGATGCTGCATCATTTTA 986 0.4381 MRGFFLGLLLFGPLLFVLASGSSRNLPIITFDEGYTPLFGDNNLAIHRDGKSVHLTLDERTGSGFVSHDIYLHGYFSASIKLPSDYTAGVVVAFYMSNGDVFQKNHDEIDFEFLGNIRGKDWRIQTNVYGNGSTNVGREERYGLWFDPAEDFHQYSILWTDSKIIFYVDDVPIREVKRTEAMGGDFPSKPMTLYATIWDGSNWATNGGKYRVNYKYAPYVAKFSNLILHGCAVDPMDSVAKCDSSEDVPSGVTPAQRIKMENFRKNHMTYSYCYDKLRYKVPPSECVINPKEAQRLRKFDPVTFGNGRRHSKRRNHRSRGSQADAASF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00507 328 Gene3D - 19 286 - -
Bva11g00507 328 Pfam Glycosyl hydrolases family 16 33 215 IPR000757 GO:0004553|GO:0005975
Bva11g00507 328 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 290 IPR013320 -
Bva11g00507 328 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 250 286 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Bva11g00507 328 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 9 307 IPR044791 GO:0004553
Bva11g00507 328 MobiDBLite consensus disorder prediction 298 328 - -
Bva11g00507 328 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 9 307 - -
Bva11g00507 328 PIRSF EndGlu_transf 4 291 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva11g00507 328 CDD GH16_XET 29 286 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva11g00507 328 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 21 223 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00507 Bva-Chr11 8655889 8658520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00507 3 327 Glycoside Hydrolase AT1G14720 68.182 3.41e-171 477
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00507 11 8655889 8658520 Bva11g00507 11 8655889 8658520 ECH