Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00471 ATGGACGACGATGCTTTGAACATGCGCAATTGGGGTTATTATGAGGCCTCCTTCAAAGCCCATCTTGGCCTGCAGCTTATGTCAAGTATGACAGATCACGACACGAAACCATATTTGTCTGGTCGTGATCCACCCATGTTAGTTGGAGCCTTTCATCCTCGTGACTGTGTTGTTTCGGAACCACCAATCCCAATGAACTATGTGAGAGACGGTTGGATGAGCCCGAGAGATAAATTTCCCAACATGTTGCCTGCAAATTCTAACTATGCTGTTCTTCCAGAGACATCAGGAGCTCCCTCTATGCAAATTGTCCAGCCACCTGATGCTTCAAGAGATGAGAGGGTGAATAGGACTGAAGAATCACCAGCTGTTAAAAATGAAGGTAGTCAATTGAAGAAAAGGCAAGGTGGGGCTGCTCCTAAGGTCCCGAAAGCTAAAAAACCTAGGAAGCCAAAGGATAATAGCAATGCAGCAGTTCCACGAGTGAAGCCGCCTAAGAAGACTATGGAGCTTGTAATAAATGGAATTGATATGGACATTTCTGGTCTACCAATTCCAGTCTGCTCTTGTACTGGGACTCCTCAGCAGTGTTATCGATGGGGCTGTGGTGGTTGGCAATCTGCATGTTGTACCACAAACGTGTCGGTGTATCCTCTGCCAATGAGCACTAAAAGACGCGGTGCAAGGATAGCTGGACGTAAAATGAGTCAAGGTGCTTTTAAGAAGGTTTTAGAGAAACTTGCAGCAGAAGGTTATAATTTTGCTCAACCAATTGATCTGAAGACTCACTGGGCAAGACATGGCACCAACAAATTTGTGACTATCAGGTA 830 0.4542 MDDDALNMRNWGYYEASFKAHLGLQLMSSMTDHDTKPYLSGRDPPMLVGAFHPRDCVVSEPPIPMNYVRDGWMSPRDKFPNMLPANSNYAVLPETSGAPSMQIVQPPDASRDERVNRTEESPAVKNEGSQLKKRQGGAAPKVPKAKKPRKPKDNSNAAVPRVKPPKKTMELVINGIDMDISGLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFAQPIDLKTHWARHGTNKFVTIR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00471 276 PANTHER - 1 276 IPR010409 -
Bva11g00471 276 Pfam GAGA binding protein-like family 1 276 IPR010409 -
Bva11g00471 276 SMART GAGA_bind_2 1 276 IPR010409 -
Bva11g00471 276 MobiDBLite consensus disorder prediction 97 165 - -
Bva11g00471 276 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00471 Bva-Chr11 8399013 8401104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00471 1 276 BBR or BPC Transcription factor family AT2G01930 58.108 2.23e-108 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bva11g00471 GAGA_bind 1.8e-108 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00471 11 8399013 8401104 Bva11g00471 11 8399013 8401104 ECH