Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01648 ATGAGGGAGGAAGCGATTGAAAAGCTACGAGGAGTAGTGAGGGACTGTGTCACCAAGCACCTCTATTCATCTGCTATCTTCTTCGCTGATAAGGTTGCTGCCTTTACCAATGATCCCGCCGATATCTACATGCAGGCTCAGGCACTCTTCCTTGGCCGCCATTACCGTCGCGCTTTTCACCTCCTCAATGCCTCCAAGATCGTCCTCCGTGACCTCCGATTCCGCTACCTTGCTGCTAAGTGTCTTGAGGAACTGAAGGAATGGGATCAATGTCTATCAATGCTTGGTGAGGCTAAAGTGGATGAAGATGGAAACGTATCTGACACAAAGGATCCCAACGTCATGTACTTAGATAAAGATGGTGAAGATCGCGAGATcaatATATCTTCAGCAATATGTTTCTTAAGAGGCAAAGCATATGAAGCTCTAGAAAACCGTGCTCAGGCACGATTGTGGTACAAAGCTGCTATAAAAGCGGATCCTTTATGCTATGAGGCTTTGGAATGTCTGATTGAAAATCACATGCTTTCATGTGAGGAAGAAGCAAATTTGATCTCATCATTGCAATTTGGTAGTGAAGATGGATGGCTCTCATCATTTTATTCATGTCTGATAAAGAAGTACGAGAAAGAAAACGTTGTCGAAGCCAAGTTCAGAGATCTTGAGAAAGAAACCTGTAAAAGTGACCAGTCTAGTTCTTTCTTGCGCACACTGAAAACCAACACTGATTTATTGGCCTGCAAAGCTGAATACTACCATCAATGTGGTGAATATCAAAAATGCTTTGACTTAACATTTACGCTGCTAGAGAAGGATCCTTTCCATCTCAAGAGTACGTTAGTACATCTGGCAGCTGCTATGGAGCTTGGACAATCGAATGAGCTCTATCTCATGTCATGCAATTTGGTTAAGGATTATCctcaaaaGGCTTTGTCATGGTTTGCTGTTGGTTGCTACTACTGTTGCATCAAGAAGTATGATCAGGCCCGTCGTTATTTCAGCAAGGCAACTAGTCTGGATGGAACATTTGCACCTGCATGGATAGGGTTTGGAAATGCTGTTGCTGCTCAAGAAGAGGGTGATCAGGCTATGTCAGTTTACCGCACTGCAGCTCGTTTGTTTCCTGGGTGCCATTTGCCAACTCTCTACATTGGAATGGAATGCATGCGAACCCACAGCTATAAGCTTGCTGAGCAGtttTTTGTGCAGGCCAAGGCAATTTGTCCCACAGATCCGCTTGTGTATAATGAACTTGGAGTGGTTGCCTATCATATGAAAGAGTATAACAAAGCAGTATGGTGGTTCGAGAAGACATTAGCACTCATCCCTTCCTCTTTAAGTGAAATGTGGGAACCGACTGTAGTTAATCTTGCTCATGCGTACAGGAAGTTGAAAATGTACCATGAAGCAATTTCATACTACGAGAAAGCACTTGCATTATCAACAAGAAGCGTGAGCACTTATGCTGGTCTGGCATACACTTATCATTTGCAgGATGACTACACCGCAGCAATTATGTACTATCACAAAGCCTTGTGGCTGAAGCCAGATGACCAGTTCTGCACTGAAATGCTAAGCTGCGCTCTAATAGATGAAAGTCGATGTGGTGTTGACCCCAAAGTTGAGTTCAGGTG 1634 0.4357 MREEAIEKLRGVVRDCVTKHLYSSAIFFADKVAAFTNDPADIYMQAQALFLGRHYRRAFHLLNASKIVLRDLRFRYLAAKCLEELKEWDQCLSMLGEAKVDEDGNVSDTKDPNVMYLDKDGEDREINISSAICFLRGKAYEALENRAQARLWYKAAIKADPLCYEALECLIENHMLSCEEEANLISSLQFGSEDGWLSSFYSCLIKKYEKENVVEAKFRDLEKETCKSDQSSSFLRTLKTNTDLLACKAEYYHQCGEYQKCFDLTFTLLEKDPFHLKSTLVHLAAAMELGQSNELYLMSCNLVKDYPQKALSWFAVGCYYCCIKKYDQARRYFSKATSLDGTFAPAWIGFGNAVAAQEEGDQAMSVYRTAARLFPGCHLPTLYIGMECMRTHSYKLAEQFFVQAKAICPTDPLVYNELGVVAYHMKEYNKAVWWFEKTLALIPSSLSEMWEPTVVNLAHAYRKLKMYHEAISYYEKALALSTRSVSTYAGLAYTYHLQDDYTAAIMYYHKALWLKPDDQFCTEMLSCALIDESRCGVDPKVEFR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01648 544 Pfam Tetratricopeptide repeat 132 161 IPR019734 GO:0005515
Bva07g01648 544 Pfam Tetratricopeptide repeat 455 512 - -
Bva07g01648 544 Pfam Anaphase-promoting complex, cyclosome, subunit 3 19 97 - -
Bva07g01648 544 ProSiteProfiles TPR repeat profile. 451 484 IPR019734 GO:0005515
Bva07g01648 544 SMART tpr_5 242 275 IPR019734 GO:0005515
Bva07g01648 544 SMART tpr_5 344 377 IPR019734 GO:0005515
Bva07g01648 544 SMART tpr_5 451 484 IPR019734 GO:0005515
Bva07g01648 544 SMART tpr_5 412 445 IPR019734 GO:0005515
Bva07g01648 544 SMART tpr_5 310 343 IPR019734 GO:0005515
Bva07g01648 544 SMART tpr_5 378 411 IPR019734 GO:0005515
Bva07g01648 544 SMART tpr_5 130 163 IPR019734 GO:0005515
Bva07g01648 544 SMART tpr_5 485 518 IPR019734 GO:0005515
Bva07g01648 544 ProSiteProfiles TPR repeat profile. 485 518 IPR019734 GO:0005515
Bva07g01648 544 ProSiteProfiles TPR repeat profile. 412 445 IPR019734 GO:0005515
Bva07g01648 544 SUPERFAMILY TPR-like 37 173 IPR011990 GO:0005515
Bva07g01648 544 PANTHER CELL DIVISION CYCLE 16,23,27 6 532 - -
Bva07g01648 544 Gene3D Tetratricopeptide repeat domain 5 530 IPR011990 GO:0005515
Bva07g01648 544 SUPERFAMILY HCP-like 312 519 - -
Bva07g01648 544 ProSiteProfiles TPR repeat profile. 310 343 IPR019734 GO:0005515
Bva07g01648 544 PANTHER CELL DIVISION CYCLE PROTEIN 16 HOMOLOG 6 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01648 Bva-Chr7 15688138 15695756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01648 289 535 Glycosyltransferase AT3G04240 23.482 8.46e-11 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01648 07 15688138 15695756 Bva07g01648 07 15688138 15695756 ECH