Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01839 ATGGGAGTGTTGACGTTCATCCTTTCACTGCATTCTCTCTCATTTGTATTCTTATTCATCATTTTCTACATAATACTAAGTAAGTTCCGGCGAGGCCGGTGTTTTTCCGGCCACGGACCACCAACTTATCCGGTAATCGGATGCCTAATACCCTTTTATAGGAACCGGAACTCACTTCTGGATTGGTACACTGACCTCCTGGCTCAGTCACCAACCAATACCATCGTAGTGCAACGACTAGGTGCACGTAGGACCATTGTGACAGCAAACCCACACAATGTGGAATACATGCTTAAGATCAACTTCAATAACTTCCCCAAAGGAAAGCCCTTCACTGAAATCCTTGGTGATTTTCTTGGCCATGGCATATTCAACGTGGATGGGGAGCTATGGCGGAGCCAACGGAGGTTCGCCAGCCATGAGTTCAGCGTAAGGTCCTCGAAGGAATTTGTGATGCAAACGTTGGAAGAAGAGGTGGATAAGAGACTCTTGCCAGTGCTGGAGTCATTGTCAATGCAAAACCAAGTGGTGGACTTGCAAGAGTTGCTGGGAAGATTCTCATTCAATGTGATCTGTAAAGTCACATCAGGGATCACCAAGTGTTGCTTAGATCCTTCTGAGCCCATTTCTCCTCTTGCAAGAGCCTTTGATGTGGCCTCAGAAATATCTGCAATGCGGGGAGCAGCGCCTTTGTTCATCATCTGGAAGATGAAGAGATGGCTCGGAATTGGATCTGAACGAAGGCTTAGGGAAGCTGTGGGAGCGATTCAGACCCATGTCATGGAAATGATTCATGagcaaaagaagatgaatgaGAGAGAAGAAACCTGCAGCGAAGACCTTCTATCAAGGCTTATATCTGCAGGTCACGAGGAAGAGGTGATTAGAGACATGGTGATAAGTTTTATGATGGCAGGGAAGGATACTACATCAGCTGCTATGACATGGTTCTTCTGGTTGCTTTCCCATCATCCAGCAATAGAGCAGCAGGTCGTGGAAGAGATAGAACTGAAGTCAGAAGGATCATTAGAATatgaattattgaagaagTTGAAGTTGCTGAAGGCATGCCTTTGTGAGTCCATGAGGCTGTATCCACCTGTGGCCTGGGATTCAAAGCATGCCTTAGTTGATGATGTTCTACCAGACGGCACTTTGGTTAAGGCAGGTGATCGAGTCACATATTTTCCCTATGGGATGGGGAGGATGGAAGCATTGTGGGGGAAGGACCGGTTTGAGTTTAGACCACATCGGTGGTTCAATGAACCGGACCAGAAAGGTGGGGCGATGAAGAAAATTGATCTCTTCAAGTTTCCGGTTTTTCAGGCCGGTCCAAGAATCTGTCTTGGGAAGGAGATGGCTTTCATTCAAATGAAGTATGTGGCGGCTTCAATACTCCGCCGGTTCAAAATCAAACCCATTATTCCAGACAAGCCTATATTCGTGCCACGCTTGACGGCACACATGGCCGGCGGCCTAAAAGTATTGGTTTCCAAGAGGGAGAAACTCACTTA 1514 0.4597 MGVLTFILSLHSLSFVFLFIIFYIILSKFRRGRCFSGHGPPTYPVIGCLIPFYRNRNSLLDWYTDLLAQSPTNTIVVQRLGARRTIVTANPHNVEYMLKINFNNFPKGKPFTEILGDFLGHGIFNVDGELWRSQRRFASHEFSVRSSKEFVMQTLEEEVDKRLLPVLESLSMQNQVVDLQELLGRFSFNVICKVTSGITKCCLDPSEPISPLARAFDVASEISAMRGAAPLFIIWKMKRWLGIGSERRLREAVGAIQTHVMEMIHEQKKMNEREETCSEDLLSRLISAGHEEEVIRDMVISFMMAGKDTTSAAMTWFFWLLSHHPAIEQQVVEEIELKSEGSLEYELLKKLKLLKACLCESMRLYPPVAWDSKHALVDDVLPDGTLVKAGDRVTYFPYGMGRMEALWGKDRFEFRPHRWFNEPDQKGGAMKKIDLFKFPVFQAGPRICLGKEMAFIQMKYVAASILRRFKIKPIIPDKPIFVPRLTAHMAGGLKVLVSKREKLT 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01839 504 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01839 504 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01839 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01839 504 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01839 504 SUPERFAMILY Cytochrome P450 39 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01839 504 PANTHER CYTOCHROME P450 14 500 - -
Bva04g01839 504 Pfam Cytochrome P450 39 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01839 504 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 14 500 - -
Bva04g01839 504 Gene3D Cytochrome P450 36 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01839 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01839 504 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01839 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01839 504 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01839 Bva-Chr4 19072628 19074249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01839 40 501 Cytochrome P450 AT3G01900 60.730 0.0 588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01839 04 19072628 19074249 Bva04g01839 04 19072628 19074249 ECH
Bva03g00297 03 1789695 1791730 Bva04g01839 04 19072628 19074249 ECH
Bva01g01517 01 16675700 16676092 Bva04g01839 04 19072628 19074249 ECH
Bva11g00582 11 9275364 9275756 Bva04g01839 04 19072628 19074249 ECH