Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01520 ATGGAGAGAGATTTCTTGGGTCTGAGCTCAAAGGAGCCATTAGCTGTGGTGAAGGAGGAGATTACCAATGATGCATGCAAAGACCCAGGATTCACTATGGGTTCAGTTGTGCAATGGCCTTTCTCCAACAAAGTGTCTGCTGTCCCACATTTGATGTCTTTCAAGGTTTCTCAAGATGACAAGACTAAAAAGATGATGTCTGATCCCCTTTCATCTACTGGATTTATGGCTATCTCAAGTGCAGATGCATATGATGCTGGTCAGAAGCGGTCTGCAACTGAACTTCAGAAACCTTTCAATCATGACGGGCAAGTTCCCAATCAAGCAATTTCAGTgtccatggggcatcccctcTTGAAGAATCATTTCGCCGGTGTTGGTCAGAGTATGGCTGgtacaaatgtcaagccacaACTACTTGGTGGATTACCTGTTACTGCTCCTCATTCAGTTCTTCCCACCGTTGGCTCGGTTTCAAAAATGACTGAATCATGTGTGAAGCCATCTGCACCTGCTCAACTTACCATCTTCTACGCGGGTACTGTCAATGTCTTTGATGATATCACCCCAGAGAAGGCACAAGCTATCATGTTTTTGGCTGGCAACGGGGTTTCTGCCGTTTCTAACACGGCACAGCCAAAAGTTCAGGTACCTTGCCCAAAGTTGGGATCAGGTGATGGTGTGCCTGTGAATCAACCCATTAATACACCACCCTGCTCTGGTCTCGCAAGCCCTCTATCTGTTTCTTCGCATACTGGTGCTCAGTCAGGGAGTGGCTCAACGAGCACAGAGGAGTTTCTGGCTGCTAAAACAACTGGAGTTCCCTCCACTCTGGTTAGCAAATCCGATCCTCCAAAAGTAGTCAATGCATCCACCATGTTGCCATCAGCCGTCCCCCAGGCACGAAAAGCATCCTTGGCTAGATTTTTGGAGAAGCGAAAGGAAAGGGTGATGAGTGCTGCACCATACAACTTGAACCAGAAGTCTGAGGAGTATGCCACTGCAGAATACAATGGTGCTAATTACTCAGCAAGGACTCCTGTTGGAGCTACTGCTTTATG 1061 0.4543 MERDFLGLSSKEPLAVVKEEITNDACKDPGFTMGSVVQWPFSNKVSAVPHLMSFKVSQDDKTKKMMSDPLSSTGFMAISSADAYDAGQKRSATELQKPFNHDGQVPNQAISVSMGHPLLKNHFAGVGQSMAGTNVKPQLLGGLPVTAPHSVLPTVGSVSKMTESCVKPSAPAQLTIFYAGTVNVFDDITPEKAQAIMFLAGNGVSAVSNTAQPKVQVPCPKLGSGDGVPVNQPINTPPCSGLASPLSVSSHTGAQSGSGSTSTEEFLAAKTTGVPSTLVSKSDPPKVVNASTMLPSAVPQARKASLARFLEKRKERVMSAAPYNLNQKSEEYATAEYNGANYSARTPVGATAL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01520 353 ProSiteProfiles Tify domain profile. 167 202 IPR010399 -
Bva01g01520 353 MobiDBLite consensus disorder prediction 241 268 - -
Bva01g01520 353 PANTHER PROTEIN TIFY 7 13 344 - -
Bva01g01520 353 Pfam tify domain 168 201 IPR010399 -
Bva01g01520 353 Pfam Jas motif 299 323 IPR018467 -
Bva01g01520 353 SMART tify_2 167 202 IPR010399 -
Bva01g01520 353 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 344 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01520 Bva-Chr1 16706621 16709780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01520 37 329 Tify Gene Family AT3G17860 40.968 1.70e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva01g01520 tify 6e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01520 01 16706621 16709780 Bva01g01520 01 16706621 16709780 ECH