Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01516 ATGAGGATTTTCTATGTCTTGCCCTGCCTTCTTTCTCTTATGCTTTCAATCTTCACCACCCCTTCAACGTCCTCCATTGATTCCTTCATCTACGGTGGTTGCTCTCAGGTGAAGTTCTGGCCGGGTTCCGCCTACGAGAACCAAGTCAACTCCCTCCTCACTTCCGTAGTCAATTCAGCCATGTACATCAGCTACAACAACTTCACCTCTCAATCTCAAGGCTCTTCCTCCGCCGTGTACGGCCTCTTCCAGTGCCGTGGCGACCTAAACTCCGGCGACTGCTCTCGTTGCGTGGACCGTGCCGTGAGCCAACTCGGCACCATTTGTCCTGGCTCGGCCGGCGGCGCGTTGCAGCTCGACGGTTGTTTTGTCAAGTATGATAACACAACGTTTTTGGGTGTGGAGGACAAGACTGTGGTGTTGAAGAAATGTGGACCGTCGATGGGTTTGACCTCAGACTCGTTGACTCACCGAGATGCTGTGCTGGCGTATTTAGGGACGTCCATTGGGTCTTACAAGGTCAGTAACTCTGGGAATGTTTATGGTGTGGCGCAGTGTACTGGAGATTTGAGCACCAGCAAGTGCCTGGATTGTGTTTCGGATGCCGTCCAACGGCTGAGAACGGAGTGTGGGGCTGCTGACTGGGGAGATATGTACTTGGCCAAGTGCTACGCGCGTTACTCGGAGCGTGGAGATCACTCGCGCGGTGGAAAGGATGATGATAACAACAAGAATGATGAAGAGATTCAGAAGACACTAGCCATTCTGATTGGACTCATAGCTGGAGTAGCCCTACTCATAgtatttctttccttcttggGCAAGGTGTACGGAAAGGATAGAGAAGGCAAATA 854 0.5082 MRIFYVLPCLLSLMLSIFTTPSTSSIDSFIYGGCSQVKFWPGSAYENQVNSLLTSVVNSAMYISYNNFTSQSQGSSSAVYGLFQCRGDLNSGDCSRCVDRAVSQLGTICPGSAGGALQLDGCFVKYDNTTFLGVEDKTVVLKKCGPSMGLTSDSLTHRDAVLAYLGTSIGSYKVSNSGNVYGVAQCTGDLSTSKCLDCVSDAVQRLRTECGAADWGDMYLAKCYARYSERGDHSRGGKDDDNNKNDEEIQKTLAILIGLIAGVALLIVFLSFLGKVYGKDREGK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01516 284 Pfam Salt stress response/antifungal 37 128 IPR002902 -
Bva01g01516 284 Pfam Salt stress response/antifungal 175 229 IPR002902 -
Bva01g01516 284 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 6 279 - -
Bva01g01516 284 ProSiteProfiles Gnk2-homologous domain profile. 132 232 IPR002902 -
Bva01g01516 284 ProSiteProfiles Gnk2-homologous domain profile. 27 131 IPR002902 -
Bva01g01516 284 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 279 - -
Bva01g01516 284 Gene3D - 151 231 IPR038408 -
Bva01g01516 284 Gene3D - 26 131 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01516 Bva-Chr1 16665454 16668332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01516 3 228 Pollen Coat Proteome AT4G20670 24.901 3.17e-16 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01516 01 16665454 16668332 Bva01g01516 01 16665454 16668332 ECH