Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01491 ATGGCTGCTTCCAAAGTGTTAATGGCTTCCTTAACCCACTTGCGTCCATTAACGTGCGCCGCTTCAGCATCAGCATCAGCATCTTATCCTACACGACTGGTGTCACAGCCACCGGACCTCATCAAATGGGTTAGAAGAGAAGGTGGGCTCGTGCATCAAGCGGTGAAGATAGCACAAGATGAATCCAGAGGTCTGGGACTCGTGGCTGCCGAAGAAATCCCAAAAGGAAGTGAGCTTATTATTCTCCGAGACCACATGCCATTGAGGTTTAACTCTACTGAATTGGAGCATGAAGATGGGCTTGATTCTGTTCTAGTGAATTTGGCAAGCCAAATTCCCGAGGAACTATGGGCAATGAAACTGGGTTTGAAGCTTCTGCAAGAAAGAGCGAAAGTTGGATCGTTTTGGTGGCCATATGTCAGCAATCTCCCAGAAACATACAGTGTGCCTATCTTCTTTCCAGGGGAGGATATAAAGAACTTGCAATATGCTCCTCTTGTTCACCAGATAAACAAAAGATGTAGGTTTCTTCTTGATTTTGAGCAAGAAGTGAAGCGTTCCCTAGAAAATCTGAAACTCGATAATCATCCTTTTGGTGGTCAAGAAGTAGATTCGTCTTCTCTTGGATGGGCAATGTCAGCTGTCTCTTCAAGGGCATTTCGATTATATGGTAACAAGCGTACAGATGGGACTCGCATAGACATCCCCATGATGCTTCCTCTGATTGATATGTGCAACCACAGTTTCAATCCAAATGCTCAAATTGTTCAGGAACAAGATACTGGTAATGCCAAGATGCTAGTGAAGgTTGTGGCTGAGACAGCTATCAAGCCATATGATCCTTTGTTACTTAGCTATGGCTGTTTAAACAATGATCTTTTGCTTCTTGACTATGGATTTGTTGTACACTCAAACCCTTACGACTGTATCGAGCTAAAATACGATGGTGATCTTTTGGATGCTGCAAGCATGGCAGCTGGAGTTAGTTCACCCAGTTTCTCAGCACCAGCTCCATGGCAGCAACAGATTTTATCTCAGTTAAATCTAGCTGGAGAAGCTCCTGATCTGAAGGTAACCTTAGGCGGTCCAGAAACCGTAGAGGGCCGGTTCTTGGCGGCTTTGCGAGTTCTTCTGGCAAGTAATGCAGAAACGGCACAGAACTGTGACCTTGACACACTCAAGTGTATATCATCAGAAGCTCCTCTTGGTGTTGCAAATGAAGTAGCTGCATTTCGCACTGTAATGGCTCTCTGCGTGATTGCTCTCAGACACTTCCCCACCAAAATAATGGAAGATGAAGCTCTGTTGAAGCAAGGTGCTTCAGGTTCAACTGAGTTGGCGATTCAGTTCAGGATTCAGAAGAAATCTGTGATTATCGATGTGATGAGAGATCTCTCAAAGAGGGTAAAGCTTCTAgaatcaaaggaaaaaatcaCTGCCGAAGTTTA 1448 0.4413 MAASKVLMASLTHLRPLTCAASASASASYPTRLVSQPPDLIKWVRREGGLVHQAVKIAQDESRGLGLVAAEEIPKGSELIILRDHMPLRFNSTELEHEDGLDSVLVNLASQIPEELWAMKLGLKLLQERAKVGSFWWPYVSNLPETYSVPIFFPGEDIKNLQYAPLVHQINKRCRFLLDFEQEVKRSLENLKLDNHPFGGQEVDSSSLGWAMSAVSSRAFRLYGNKRTDGTRIDIPMMLPLIDMCNHSFNPNAQIVQEQDTGNAKMLVKVVAETAIKPYDPLLLSYGCLNNDLLLLDYGFVVHSNPYDCIELKYDGDLLDAASMAAGVSSPSFSAPAPWQQQILSQLNLAGEAPDLKVTLGGPETVEGRFLAALRVLLASNAETAQNCDLDTLKCISSEAPLGVANEVAAFRTVMALCVIALRHFPTKIMEDEALLKQGASGSTELAIQFRIQKKSVIIDVMRDLSKRVKLLESKEKITAEV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01491 482 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 479 - -
Bva01g01491 482 ProSiteProfiles SET domain profile. 53 287 IPR001214 GO:0005515
Bva01g01491 482 CDD SET_LSMT 54 301 - -
Bva01g01491 482 Pfam SET domain 64 287 IPR001214 GO:0005515
Bva01g01491 482 Pfam Rubisco LSMT substrate-binding 335 457 IPR015353 -
Bva01g01491 482 Gene3D set domain protein methyltransferase, domain 1 8 300 - -
Bva01g01491 482 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 297 477 IPR036464 -
Bva01g01491 482 Gene3D - 329 479 IPR036464 -
Bva01g01491 482 PANTHER F21J9.27 5 479 - -
Bva01g01491 482 SUPERFAMILY SET domain 38 305 IPR046341 -
Bva01g01491 482 SMART set_7 53 293 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01491 Bva-Chr1 16404155 16408682 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva01g01491 SET 7.1e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01491 01 16404155 16408682 Bva01g01491 01 16404155 16408682 ECH