Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01486 ATGGATTCTTCCAAGTCTCTGCGTTTCATCACCCACCAATCAGTCTTCTCCACCGTTCGATCTGGGGACCTTGATGGGCTTAAGAACCTGATTGAGGACCAAACTTCAAATGGGTCATCGGTTTCTGATCTCATGTCACTGCAGAACGATGCTGGAGAAACTGCTCTTTACATCGCTGCAGATAATAATCTTCAGGAAGTGGTTAGCTACTTGCTTAAGCTCTCTGATTTGGAGGTATTAAAGATAAGGTCCAAGTCTGATATGAACCCGTTTCACATAGCAGCCAAGCGTGGTCATCTGGATATCGTGAAGGAGTTCTTGAGTAAATGGCCTGAGGTTTGTAAGCTATGTGACTCCTCAAACACTAGTCCCCTATATTTAGCTGCTGTTCAAGACCATTTGAATGTAGTGAATGCTATCCTGGATGCTGATGTCAGTTCAATGATGATAGTtaggaaaaatggaaaaactgCATTGCATAATGCTGCTAGGTATGGCATGGTTCGTATGGTGAAAGCACTTATTGACCGAGATCCGGGAATAGTCTGcatcaaagataaaaaaggCCAAACTGCACTGCACATGGCTGTGAAAGGACAGTGTCCTGTTGTTGTGGAAGAGATATTGCAAGCTGTTCCCACTATACTGAATGAACGAGATAAGAAGGGTAATACAGCTCTACACATGGCCACGAGGAAAGGACGTTCACAGACAGTGAGCCTTTTGCTAAGTTATACAGCTATAGATATCAATGCCATCAACAAACAGCAGGAAACTGCATTGGATTTGGCAGATAAACTGCAGTATGGGGATTCAGCTTTGGAAATTCAGGAAGCCTTTCAAGAATCTGGTGCCAAGCATGCCAGGAATGTTGGCAAAGTGGATGAGGCCATGGAGCTGAAAAGAACTGTCAGTGACATAAAGCATGAGGTGCAGTCACAACTCATACAGAATGAAAAAACTCGCCGGCGAATGTCTGGCATAGCTAAAGAACtgaaaaaaattcatagaGAAGCAGTACAGAACACCATTAACTCAGTCACCGTTGTCGCTGTCCTCTTCGCCTCAATTGCATTCTTGGCTATATTCAACTTGCCTGGTCAATATCTGACGAAAGGATCAGAGACAGGGAAAGCTAACATAGCTGATAATGTTGCTTTCCAAGCTTTCTGCCTTCTGAATGCTAcatctcttttcatttctctagCTGTTGTTGTAGTTCAAATCACTTTGGTAGCCTGGGACACTAGAGCTCAAAAGCAGGTTGTTTCAGTGGTTAACAAGCTAATGTGGGCTGCATGTGCTTGCACTTGTGGGGCTTTTCTGGCAATAGCTTTTGTGGTTGTTGGAAAGGAAAGCAAATGGATGGCCATAACCGTAACACTTTTTGGAGCACCAGTACTGGTTGGAACTCTTGGAGGGTTatgctattttgtttttaagcaACATTTTGGGTTTTTTGGCAATGACTCCCAAAGACGCATTAAGAGAGCAAGTGGAAGCAAATCATTCTCATGGTCTTATTCTGCAAATATATCTGGTGTGGATGACTATGATTCTGACCTTGAGAAGATTGTTGCTCTGTA 1586 0.4136 MDSSKSLRFITHQSVFSTVRSGDLDGLKNLIEDQTSNGSSVSDLMSLQNDAGETALYIAADNNLQEVVSYLLKLSDLEVLKIRSKSDMNPFHIAAKRGHLDIVKEFLSKWPEVCKLCDSSNTSPLYLAAVQDHLNVVNAILDADVSSMMIVRKNGKTALHNAARYGMVRMVKALIDRDPGIVCIKDKKGQTALHMAVKGQCPVVVEEILQAVPTILNERDKKGNTALHMATRKGRSQTVSLLLSYTAIDINAINKQQETALDLADKLQYGDSALEIQEAFQESGAKHARNVGKVDEAMELKRTVSDIKHEVQSQLIQNEKTRRRMSGIAKELKKIHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYLTKGSETGKANIADNVAFQAFCLLNATSLFISLAVVVVQITLVAWDTRAQKQVVSVVNKLMWAACACTCGAFLAIAFVVVGKESKWMAITVTLFGAPVLVGTLGGLCYFVFKQHFGFFGNDSQRRIKRASGSKSFSWSYSANISGVDDYDSDLEKIVAL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01486 528 ProSiteProfiles Ankyrin repeat region circular profile. 222 247 - -
Bva01g01486 528 SMART ANK_2a 120 150 IPR002110 GO:0005515
Bva01g01486 528 SMART ANK_2a 86 115 IPR002110 GO:0005515
Bva01g01486 528 SMART ANK_2a 154 183 IPR002110 GO:0005515
Bva01g01486 528 SMART ANK_2a 188 217 IPR002110 GO:0005515
Bva01g01486 528 SMART ANK_2a 222 252 IPR002110 GO:0005515
Bva01g01486 528 SMART ANK_2a 51 79 IPR002110 GO:0005515
Bva01g01486 528 Gene3D - 148 307 IPR036770 -
Bva01g01486 528 Pfam Ankyrin repeats (3 copies) 91 177 IPR002110 GO:0005515
Bva01g01486 528 Pfam Ankyrin repeats (3 copies) 186 252 IPR002110 GO:0005515
Bva01g01486 528 ProSiteProfiles Ankyrin repeat profile. 222 255 IPR002110 GO:0005515
Bva01g01486 528 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 2 528 - -
Bva01g01486 528 SUPERFAMILY Ankyrin repeat 17 269 IPR036770 -
Bva01g01486 528 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 2 528 - -
Bva01g01486 528 Pfam Domain of unknown function 338 447 IPR026961 -
Bva01g01486 528 ProSiteProfiles Ankyrin repeat region circular profile. 154 177 - -
Bva01g01486 528 Gene3D - 10 147 IPR036770 -
Bva01g01486 528 ProSiteProfiles Ankyrin repeat profile. 154 177 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01486 Bva-Chr1 16377215 16380528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01486 5 528 Miscellaneous Gene Families AT2G01680 69.737 0.0 754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01486 01 16377215 16380528 Bva01g01486 01 16377215 16380528 ECH