Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01484 ATGTCGTGGGAAGATGGGATAGTGATCCGTGATGTTACAAATGCGGGTCTCGTAGTGAGTGATCGCATTGGCCGAGAAGTTGCGTCTCAGCTCGACCTTGAAGAAGCCCTAGAGGCTTCCAGATATGCTAGTCATCCTTATTCTACTCATCCGAGAGAGTGGGCCCCTTTACTTGAGGTTGTGGATACTTGGGAGTTGCCTCCTGTGCTCATTGAAAGATACAATACGGCTGGTGGGGAAGGAACTGCTTTATGTGGAATATTTCCTGAAATACGTAGGGCATGGGCATCTGTGGATAATTCCTTGTTCCTTTGGCGTTTTGATAAGTGGGATGGCCAGTGTCCTGAATATAGTGGGGAGGAGCAAGCTATTTGTGCTGTTGGCCTTGCGAAATCAAAATCTGGTGTTTTTGTTGAAGCTATCCAGTATCTTTTAGTGTTAGCAACACCCGTTGAGTTGACTTTAGTAGGAGTGTGCTGCTCTGGAGTAGATGGCTCAGATCCATTTGCAGAAGTTTCGTTGCAGCCTTTGCCAGATTATACAGTGCCATCTGATGGGGTCACAATGACTTGCATAGCATGTACTGAAAAAGGTCGTATTTTCCTTGCTGGTCGCGATGGACACATATACGAACTTCTTTATTCAACTGGTTCAGGCTGGCAAAAGCGCTGTCGAAAGGTCTGCCACACAGCTGGTTTAAGCAGTGTCATTTCTAGATGGGTTGTACCAAATGTATTTAACTTTGGAGCTGTTGACCCCATTGTTGAAATGGTCTTTGATAATGAGCGGAAAATTTTGTATGCACGAACTGAAGAGATGAAACTTCAGGTTTATGTTCTTGGGCCAAATGGTGATGGTCCATTAAAGAAAGTGGCTGAAGAAAGGAACCTTGTCAGTCAGAGGGATGCACACTATGGAGGTAGACAACCAACGGGACCAAGAATCTCAAACCGATCACCAAAGGCATCTATTGTTGGCCTCTCACCTTTATCTACACTTGAATCCAAGTGGCTACATCTAGTTGCTATTTTATCAGATGGTAGAAGGATGTATCTATCCACCTCTCCTTCTACTGGAAGCCTGACTGGGTTCAATACTAACCATCATAAGCCAAGCTGTTTGAAGGTTGTTACGACAAGGCCTGCTCCTCCTTGGGGGGTTAGTGGTGGACTCTCTTTTGGAGCCATGTCTCTTGCAAGTAGACCTCAAAATGAGGATCTGTCATTGAAAGTGGAGGCAGCTTATTATTCTGCAGGAACTCTTATCCTTTCAGATGCATCACCTCCAACCACATCTTCACTCCTTATTGTTAACAAGGATTCAAGCACACAGTCATCTGTGTCAGGTAGTCAAGGTGCAAGTGCGAGGGGTTCCCGGGCATTACGGGAATCTGTATCTTCTTTACCAATTGAAGGACGAATGCTTTTTGTAGCAGATATTTTACCATTGCCAGATACTTCAGCTACTGTGCAGTCTTTATATTCAGAAATTGAGTTTGGTGGACTTGAGAACTCAATGGATTCATATGATAGGGCTTCTGGTAAACTCTGGGCAAGGGGTGACCTCTCAACCCAACATATATTGCCAAGGAGGAGGATTGTGATTTTCAGCACCATGGGCATGATGGAAATAGTTCTTAACAGACCAGTGGACATTCTCAGAAGGTTATTTGAGTCCAACTCTCCAAGATCAGTTTTAGAAGATTTCTTTAATCGTTTTGGTGCAGGTGAGGCAGCTGCAATGTGTCTTATGCTGGCTGCTAGAATATTGCattctgaaaattttatcaGCAATGTTGTTGCCGAGAAGGCTGCTGAAGCTTTTGAGGATCCAAGACTTGTTGGAATGCCACAACTTGAAGGTAGTAGTGCCTTATCAAATACGAGAACTGCTTCTGGTGGATTCAGCATGGGCCAAGTTGTTCAGGAGGCTGAGCCTGTGTTTTCTGGTGCACATGAAGGACTCTGCTTATGTTCATCTAGGTTACTTTTCCCTCTGTGGGAACTTCCTGTAATGGTTGTGAAAGGCAGTTTGGGTCCTTCAGGTGATTTATCTGAAAATGGGGTAGTTGCATGCAGACTCTCTGTTGGGGCTATGCAAGTCCTTGAACACAAAATTCGATCTTTAGAGAAATTCCTGAGATCTAGACGGAACCAGAGGAGAGGACTTTATGGCTGTGTAGCAGGATTAGGGGACCTCAGTGGTTCTGTTTTGTATAGTAGTGGTTCAGCATTAGGTGCTGGTGATCGGAGTATGGTGAGAAACTTATTTGGTGCATATTCAAGAAATATGGACTCTAACAGTAGTGGAACATCTAATAAAAGACAAAGACTTCCATATAGTCCTGCAGAATTGGCTGCCATGGAGGTGAGGGCAATGGAATGCATTAAGCAGTTGCTTCTTAGATCTGGTGAAGCCTTATTTTTGCTCCAGCTTCTTTCTCAGCATCATGTCACGAGATTGATTCAGGGATTTGATGCTAACCTTCAACATGAATTAGTTCAATTAACATTTCATCAACTTGTTTGTTCTGAGGAGGGTGACCGTCTTGCCACAAGACTTGTATCTGCTCTTATGGGGTATTATACTGGAAGTGATGGCAGGGGGACTGTTGATGATATTAGCACAAAATTAAGAGAGGGTTGTCCTAGCTACTATAAAGAGTCCGATTACAAGTTCTTTCTAGCTGTGGAAGGTTTGGAGAGAGCTGCTGTGACTTCAGATGCCAAGGAAAAGGAGAGCCTCGCAAGGGATGCATTTACTCTCTTGAGCAAAGTTCCAGAATCTGCTGACTTACGAACTGTTTGCAAACGTTTTGAGGATTTAAGATTCTATGAAGCTGTAGTGCGCTTACCTCTTCAAAAGGCCCAAGCTCTTGACCCTGCAAATGATGCTTTTAATGATGAAATTGATGCAGCTGTCAGAGAACAAGCACTTGCTCAGCGTGAACAATGTTATGAGATAATTATTAGTGCTTTGCGTTCTCTGAAAGGTGCCTCACAGAGGGAATTTGGCTCCCCCATGAGACCTGCTCCATCTCATTCTGTTCTTGATCAGGCCTCtcgaaagaaatatatatgccAGATTATTCAGCTTGGTGTTCAATCACCTGACAGATTGTTCCATGAGTACCTATATCAGGCTATGATTGATTTGGGTCTTGAGGATGAATTGTTAGAGTATGGAGGTCCTGATTTGGTGCCTTTTTTGGATAATGCTAGCCGTGAACATGTACAAGAGGTTCGAGCTCTGACAGCAACAACTTCTTCAATGGGACAATCTGGATCATCTTTGTCATCTAGTCAAGTCAAGAACTCTGAACTTTTAGCACGTTATTATGTCTTGAAGCGGCAGCATATGCTTGCAGCTTACACATTGCAAAGATTAGCTGAGAGGCGCTGTATGGATGGAGTACCTACACTGGAACAAAGATGTCAATATTTAAGTAATGCAGTCATACAGGCTAAGAGTGCTAGTAATAGTGATGGATTGCTAGGCTCTACTCGGAATCCCATTGACAATGGATTGCTAGATTTGCTAGAAGGGAAGCTTGCTGTTCTTCAGtttcagataaaaattaaagaggaaTTGGAAGCTATATCTTCCAGGTCAGAAGTTTCAGCTAGCACATCTGATACTGCCCAAAATGGTTTAGCCCCTGAAGACAACTTAAATTCAGATGCTAATACTGCAAATGCTGCACGAGAAAAGGCCAAAGAGCTATCATTAGATGTGAAGAATATAACACAATTATATAATGAATATGCTGTTCCCTTTGAGCTCTGGGAGATATGTTTGGAGATGCTATACTTTGCCTGCTACACTGGTGAAGCCGATAGCAGCATTGTCAGAGAAACTTGGGCTAGACTTATTGATCAAGCTCTTTCAAGAGGTGGCACTGCTGAAGCATGCTCTGTAATCAAAAGGGTTGGTCCCCGCCTTTATCCGGGCGATGGGGCCGTTTTACCTCTTGAATCTATCTGTCTTCACCTGGAGAAAGCTGCAATGgagaGGTTGAACTCAGGGATTGAATCTGTGGGAGATGAAGATGTTGCAAGAGCCGTTCTTTCTGCTTGTAAAGGCGCGGCTGAACCCGTGTTGAACGCATATGATCAACTGTTATCAAGCGGTGCCGTTTTGCCATCACCAAATCTTAGATTACGCATGCTGAGATCAGTGCTAGTGGTGCTTCGTGAGTGGGCCATGTCTGAATTTGCACAGAGGATAGGTACTACTGCCACTGGGGCTTCCTTAATTCTAGGTGGCGGATTTTCGATGGAGCGAACGGTTGTTAATCAAGGCATCCGAGATAAGATAACAAGTGCATCAAACAGGTACATGACCGAAGTGAGGAGGTTGGCCCTTCCGCAGAGCCAAACTGAAGCTGTTTACAGAGGCTTTAAGGAACTTGAAGAATCACTTATAAGTCCTTATTCTTTTGATCGATTTTG 4451 0.4343 MSWEDGIVIRDVTNAGLVVSDRIGREVASQLDLEEALEASRYASHPYSTHPREWAPLLEVVDTWELPPVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGEEQAICAVGLAKSKSGVFVEAIQYLLVLATPVELTLVGVCCSGVDGSDPFAEVSLQPLPDYTVPSDGVTMTCIACTEKGRIFLAGRDGHIYELLYSTGSGWQKRCRKVCHTAGLSSVISRWVVPNVFNFGAVDPIVEMVFDNERKILYARTEEMKLQVYVLGPNGDGPLKKVAEERNLVSQRDAHYGGRQPTGPRISNRSPKASIVGLSPLSTLESKWLHLVAILSDGRRMYLSTSPSTGSLTGFNTNHHKPSCLKVVTTRPAPPWGVSGGLSFGAMSLASRPQNEDLSLKVEAAYYSAGTLILSDASPPTTSSLLIVNKDSSTQSSVSGSQGASARGSRALRESVSSLPIEGRMLFVADILPLPDTSATVQSLYSEIEFGGLENSMDSYDRASGKLWARGDLSTQHILPRRRIVIFSTMGMMEIVLNRPVDILRRLFESNSPRSVLEDFFNRFGAGEAAAMCLMLAARILHSENFISNVVAEKAAEAFEDPRLVGMPQLEGSSALSNTRTASGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVVKGSLGPSGDLSENGVVACRLSVGAMQVLEHKIRSLEKFLRSRRNQRRGLYGCVAGLGDLSGSVLYSSGSALGAGDRSMVRNLFGAYSRNMDSNSSGTSNKRQRLPYSPAELAAMEVRAMECIKQLLLRSGEALFLLQLLSQHHVTRLIQGFDANLQHELVQLTFHQLVCSEEGDRLATRLVSALMGYYTGSDGRGTVDDISTKLREGCPSYYKESDYKFFLAVEGLERAAVTSDAKEKESLARDAFTLLSKVPESADLRTVCKRFEDLRFYEAVVRLPLQKAQALDPANDAFNDEIDAAVREQALAQREQCYEIIISALRSLKGASQREFGSPMRPAPSHSVLDQASRKKYICQIIQLGVQSPDRLFHEYLYQAMIDLGLEDELLEYGGPDLVPFLDNASREHVQEVRALTATTSSMGQSGSSLSSSQVKNSELLARYYVLKRQHMLAAYTLQRLAERRCMDGVPTLEQRCQYLSNAVIQAKSASNSDGLLGSTRNPIDNGLLDLLEGKLAVLQFQIKIKEELEAISSRSEVSASTSDTAQNGLAPEDNLNSDANTANAAREKAKELSLDVKNITQLYNEYAVPFELWEICLEMLYFACYTGEADSSIVRETWARLIDQALSRGGTAEACSVIKRVGPRLYPGDGAVLPLESICLHLEKAAMERLNSGIESVGDEDVARAVLSACKGAAEPVLNAYDQLLSSGAVLPSPNLRLRMLRSVLVVLREWAMSEFAQRIGTTATGASLILGGGFSMERTVVNQGIRDKITSASNRYMTEVRRLALPQSQTEAVYRGFKELEESLISPYSFDRF 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01484 1483 MobiDBLite consensus disorder prediction 1204 1231 - -
Bva01g01484 1483 Gene3D - 530 882 - -
Bva01g01484 1483 Gene3D - 1178 1436 IPR042538 -
Bva01g01484 1483 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 870 1290 IPR007187 -
Bva01g01484 1483 Gene3D Nucleoporin, helical domain, central subdomain 1054 1152 IPR042537 -
Bva01g01484 1483 Pfam Nup133 N terminal like 54 542 IPR014908 -
Bva01g01484 1483 PANTHER BNAC05G49530D PROTEIN 3 1480 - -
Bva01g01484 1483 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 3 1480 IPR004870 GO:0005643|GO:0006913|GO:0017056
Bva01g01484 1483 Gene3D - 893 1052 IPR042533 -
Bva01g01484 1483 Coils Coil 963 983 - -
Bva01g01484 1483 Coils Coil 1231 1251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01484 Bva-Chr1 16351938 16362271 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01484 01 16351938 16362271 Bva01g01484 01 16351938 16362271 ECH