Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01479 ATGGCGACAATGACGAGCTTGATCGGGCtaataaacaaaatccaaCGGGCGTGTACGGTGTTGGGTGATCATGGTGGCGAGGGATTGTCCCTCTGGGAGGCTCTTCCGACGGTGGCGGTGGTCGGTGGCCAGAGTTCTGGGAAGTCATCTGTGTTGGAAAGTGTGGTGGGAAGAGATTTTCTGCCTCGTGGATCTGGTATTGTCACACGGAGGCCTCTTGTGTTGCAACTTCACAAGACAGATGACGGGCAACGTGAATATGCTGAGTTTCTTCATGCACCAAGAAAGAGACTCACTGATTTTGCTGCTGTTAGGCAGGAAATTGCAGATGAAACAGATCGTATAACTGGGAAGTCAAAGCAAATTTCCAACGTTCCAATTCATCTGAGCATatactctccacatgTTGTAAACTTAACTCTCATAGATCTTCCTGGGTTGACAAAGGTTGCAGTagAGGGACAACCTGAAAGTATTGTTCAAGATATTGAAAACATGGTCCGTTCTTATGTTGAGAAGCCAAACTGCATTATATTGGCGATTTCTCCAGCAAATCAAGATATTGCAACCTCAGATGCTATAAAACTTGCAAAAGAAGTTGATCCTTCAGGTGAAAGAACATTTGGAGTGTTGACAAAACTTGATCTTATGGATAAGGGAACGAATGCTGTTGATGTTCTTGAAGGGAGACAGTATAGGCTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCTGATATTAATAGAAATGTTGACATGATTGTTGCTCGTAAGAAGGAGCGTGAATATTTTGAGACAAGCCCTGAATATGGACATCTGGCACATAAAATGGGCTCAGAATATCTTGCTAAGCTTCTGTCTGAGCATTTGGAGCGTGTTATCAGGCAGCGGATACCTAGTATTATTGCCTTAATAAATAAGaccattgatgaaattaatgcAGAATTGGACCGTATTGGGAGGCCCATTGCAGTAGACTCAGGGGCCCGGCTGTATACTATTTTGGAGATGTGTCGGGCATTTGATAAAGTATTTAAGGAACACCTGGATGGAGGGCGTCCTGGTGGGGACCGgatatataaagtttttgaCAACCAATTACCAGCTGCCTTAAAAAAGCTCCCCTTTGATCGTCATTTATCCATAAAAGGTGTCCAGAGAGTTGTTATGGAAGCTGATGGGTATCAGCCCCATCTGATTGCTCCAGAGCAAGGGTACAGAAGACTTATTGATGGGTGCATCAGCTATTTCAAAGGCCCAGCTGAAGCCTCTGTTGATGCTGTTCACTTTGTTTTGAAGGAACTTGTACGGAAGTCAATTTCAGAAACTGAGGAATTGAAAAGATTTCCAACACTTGCAGCTGATTTAGCTGCTGCTGCAAATGAGTCATTGGAAAAATTTCGAGAAGAAAGCAGGAAGACAGTTCTACGGCTGGTGGATATGGAATCTAGCTATCTAACAGTGGAGTTTTTCCGGAAGATTCATCTCGAACCagaaaaaattccaaataagaaagataaagatCAAGCTCCAACCTATATGGACACGGATCATCATCTCAGGAAGATTGCATCCAACGTCAGTTCTTATATCAACATGGTTTGTGAGACTCTTAAGAATTCTATGCCAAAGGCTGTGGTTTATTGTCAAGTTAGAGAGGCAAAGAGATCATTGCTAAACAACTTCTATGTTCAAGTTGGGAAGAGGGAGAAGGAACAATTGGGCGCCATGTTAGATGAAGACCCATCTCTTATGGAAAAGAGATCACAATTAGCCAAGAGGCTTGAACTATACAAGCAAGCTAAGGATGACATTGAATCCGTAGCTTggaaata 1841 0.4134 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPTVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTDDGQREYAEFLHAPRKRLTDFAAVRQEIADETDRITGKSKQISNVPIHLSIYSPHVVNLTLIDLPGLTKVAVEGQPESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLAKEVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINRNVDMIVARKKEREYFETSPEYGHLAHKMGSEYLAKLLSEHLERVIRQRIPSIIALINKTIDEINAELDRIGRPIAVDSGARLYTILEMCRAFDKVFKEHLDGGRPGGDRIYKVFDNQLPAALKKLPFDRHLSIKGVQRVVMEADGYQPHLIAPEQGYRRLIDGCISYFKGPAEASVDAVHFVLKELVRKSISETEELKRFPTLAADLAAAANESLEKFREESRKTVLRLVDMESSYLTVEFFRKIHLEPEKIPNKKDKDQAPTYMDTDHHLRKIASNVSSYINMVCETLKNSMPKAVVYCQVREAKRSLLNNFYVQVGKREKEQLGAMLDEDPSLMEKRSQLAKRLELYKQAKDDIESVAWK 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01479 613 ProSiteProfiles GED domain profile. 522 613 IPR020850 -
Bva01g01479 613 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Bva01g01479 613 Gene3D - 4 310 IPR027417 -
Bva01g01479 613 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Bva01g01479 613 Gene3D Dynamin, middle domain 334 590 - -
Bva01g01479 613 PANTHER BNAA09G45430D PROTEIN 4 613 - -
Bva01g01479 613 Pfam Dynamin GTPase effector domain 518 610 IPR003130 GO:0003924|GO:0005525
Bva01g01479 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Bva01g01479 613 Pfam Dynamin family 38 213 IPR045063 -
Bva01g01479 613 PANTHER DYNAMIN 4 613 IPR022812 -
Bva01g01479 613 SMART GED_2 517 610 IPR003130 GO:0003924|GO:0005525
Bva01g01479 613 Pfam Dynamin central region 222 489 IPR000375 -
Bva01g01479 613 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Bva01g01479 613 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Bva01g01479 613 PRINTS Dynamin signature 35 53 IPR022812 -
Bva01g01479 613 PRINTS Dynamin signature 60 77 IPR022812 -
Bva01g01479 613 PRINTS Dynamin signature 183 201 IPR022812 -
Bva01g01479 613 PRINTS Dynamin signature 202 218 IPR022812 -
Bva01g01479 613 PRINTS Dynamin signature 133 150 IPR022812 -
Bva01g01479 613 PRINTS Dynamin signature 225 244 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01479 Bva-Chr1 16305910 16315102 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01479 01 16305910 16315102 Bva01g01479 01 16305910 16315102 ECH