Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01471 ATGGCTGCTTTGCAGAGCGTGGCACAGTCCAACATGAGCACCAGTGGAAACAGCTATAGCTCCTGCAAGGACGGCGCTGCTGCCACTCCTGCTTCTGAAAACATGGTTTCTGATCAGTTCCCGGCGGGTCTCAGGGTTATGGTGGTGGATGACGATGCCACCACCTTGAAAATTATTGAGCAAATGTCTCGCCGATGTCGTTATAACGTTACCACATGTTTTCGAGCCACTGTTGCTTTGAATCTTCTGCGGGAGAGGAAAGGCTCTTTTGATGTGGTACTGAGTGATGTTCATATGCCGGACATGGATGGCTATAAGCTCCTTGAACTTATTGGGCTGGAAATGGACCTTCCTGTTATTATGATGTCTGCTGATAGTAGAACAAGTGCTGTCATGAAGGGAATTAGACATGGAGCTTGTGATTATTTGATTAAGCCTGTTCGTGAGGAAGAACTGAAGAATATATGGCAGCATGTGGTTAGGAAAAAatggaatgaagaaaataaagaacatGAACATTCTAGCAGCTTGGATGACAATGATCGGAATAAACGAGGAAATGATGAAGCTGAATATACTTCTTCTGTTATTGATGCAGCAGAAGTAGTTAAAGCTCCTAAAAGGAGGAGCACTTCAAAGGAAGATGTTGATAGTGACCTGGAGAATGATGATCCATCCACAACAAAGAAGCCTCGTGTGGTGTGGTCGGTGGAATTGCATCAACAATTTGTCAGTGCTGTAAACCAACTTGGGCTAGACAAGGCTGTGCCGAAGAGAATTCTTGAGTTGATGAATGTGCCTGGTTTGACTAGAGAAAATGTTGCAAGCCATTTGCAGAAATTTAGGCTTTATTTAAAGAGAATAAGTGGAGTTGCACAGCAACAAAACTCAATTTCTGGGCCTGTAGAATCTAATATGAAACTGGGAGGACTTGGAAGATTTGGCATTCAAGCTCTGGCTGCTACTGGCCATGTTCCTCCTGAAACACTAGCTGCCCTTCATGCTGAGCTTTATGGTCATCCAGCTGGTAATGTAATTTCGACGATGGACCAGACTGCTCTCCTGCAAGCATCCATCCATGGGTCCAAGCATTATCCTGCAGAACATGGCGTGGCGTATGGTCAGCCACTAGTAAAATGTCCTTCCAATGTTTCCAAGAGTTTTCCTCAGGGCATTTTAACTGTAGATGATGCATCTCCAGCATATGGAGCATGGCCACCGTCTAACACTGTTGGTTCACTAGGACCCAATAGTATACTTGAAGGTGCGGGTCCTCAGCATAATAACATGATGGATACGTTGCAGCATCAGCACCAGCAAAGACAGCTGCCCCAGCAGATGCAACAGCAACAGTTGCAGCATCAGTCAACAATACATGATCAAAGTCGTTCTATCAACGTGCAACCATCTTGCCTTGTGGTCCCCTCTAAATCTTCTGGCAGTCTCCCGGCAGGAAATAGACATGCTTCGGTCAATCAAAATAGCAGATTTGGCAGGAATCCTTTTATCGATTATAGTCTCTTTTCACCTCAATCAAATGATTCTTCATTAAATGTCGCTCAGTTCCCTGATGGGGAAATCAATGGAAGAGGTGTTCTCTCTCGGTATAATTCTCCTAGCACCATTTCTCCTTCAGCTTCACTTGGTCCATTAAATACTGACAATAGCAATACCCAGCAGCTCCAAAACTCAGCTTTGACATTAGGTTCTTTGAAACAATTTCCAACTGGTGTGCCCAATATATCTGATACCCAAGGTCTGTATTGCACTGGATCGGGTGATGCCCTCGGTCAAGGAGCTCTTAGGAATCTTGGATTTGTTGGTAAAGGTACCTCTATTCCAAGCAGGTTTGCTGCACATGAAATTGAATCATCAATGAATGAGTTTAGTCAAGGGAACATCTCTGTAGATAGCAATGGTAACACAGTGAAGGAGGAACCGAATATTGATTTCGTGGATAATTCAAAAGGGGGCTTCCCAGCCTTTCGAAGATATTG 1997 0.4387 MAALQSVAQSNMSTSGNSYSSCKDGAAATPASENMVSDQFPAGLRVMVVDDDATTLKIIEQMSRRCRYNVTTCFRATVALNLLRERKGSFDVVLSDVHMPDMDGYKLLELIGLEMDLPVIMMSADSRTSAVMKGIRHGACDYLIKPVREEELKNIWQHVVRKKWNEENKEHEHSSSLDDNDRNKRGNDEAEYTSSVIDAAEVVKAPKRRSTSKEDVDSDLENDDPSTTKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRISGVAQQQNSISGPVESNMKLGGLGRFGIQALAATGHVPPETLAALHAELYGHPAGNVISTMDQTALLQASIHGSKHYPAEHGVAYGQPLVKCPSNVSKSFPQGILTVDDASPAYGAWPPSNTVGSLGPNSILEGAGPQHNNMMDTLQHQHQQRQLPQQMQQQQLQHQSTIHDQSRSINVQPSCLVVPSKSSGSLPAGNRHASVNQNSRFGRNPFIDYSLFSPQSNDSSLNVAQFPDGEINGRGVLSRYNSPSTISPSASLGPLNTDNSNTQQLQNSALTLGSLKQFPTGVPNISDTQGLYCTGSGDALGQGALRNLGFVGKGTSIPSRFAAHEIESSMNEFSQGNISVDSNGNTVKEEPNIDFVDNSKGGFPAFRRY 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01471 665 MobiDBLite consensus disorder prediction 410 463 - -
Bva01g01471 665 PANTHER TWO-COMPONENT RESPONSE REGULATOR 38 406 IPR045279 GO:0009736
Bva01g01471 665 PANTHER TWO-COMPONENT RESPONSE REGULATOR 408 589 IPR045279 GO:0009736
Bva01g01471 665 MobiDBLite consensus disorder prediction 407 463 - -
Bva01g01471 665 Pfam Response regulator receiver domain 46 154 IPR001789 GO:0000160
Bva01g01471 665 MobiDBLite consensus disorder prediction 166 191 - -
Bva01g01471 665 MobiDBLite consensus disorder prediction 202 228 - -
Bva01g01471 665 Pfam Myb-like DNA-binding domain 232 280 IPR001005 -
Bva01g01471 665 MobiDBLite consensus disorder prediction 1 24 - -
Bva01g01471 665 SMART REC_2 44 156 IPR001789 GO:0000160
Bva01g01471 665 MobiDBLite consensus disorder prediction 166 229 - -
Bva01g01471 665 Gene3D - 44 180 - -
Bva01g01471 665 SUPERFAMILY CheY-like 43 175 IPR011006 -
Bva01g01471 665 SUPERFAMILY Homeodomain-like 227 287 IPR009057 -
Bva01g01471 665 CDD REC_typeB_ARR-like 46 160 - -
Bva01g01471 665 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 227 286 IPR017930 -
Bva01g01471 665 PANTHER TWO-COMPONENT RESPONSE REGULATOR 38 406 - -
Bva01g01471 665 PANTHER TWO-COMPONENT RESPONSE REGULATOR 408 589 - -
Bva01g01471 665 Gene3D - 226 289 - -
Bva01g01471 665 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 230 283 IPR006447 GO:0003677
Bva01g01471 665 ProSiteProfiles Response regulatory domain profile. 45 160 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01471 Bva-Chr1 16237382 16243475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01471 38 314 Response Regulator Gene Family AT2G25180 54.122 4.00e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bva01g01471 Response_reg 1.3e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01471 01 16237382 16243475 Bva01g01471 01 16237382 16243475 ECH