Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01454 ATGGGTGAAGGCATAGTCAAGAGAGCTTTAGAGAGTTTAGGGAAAGGTTTCGACTTGACGTCGGATTTTAGGTTAAAATTCTGCAAAGGGGAAGATCGTTTGGTTCTTCTGAATGAGGCAGAGAGAAGAGAGCTCGAAGTTCCTGGTTTTGGACCTGTCAAAGATGTCTCCGTTGATATCAAGTGTGATAAGGGCGAGAGGACTCGGCACCAGCCTGATATTCTCACCTTCAACCAAATGTCAGAGTCTTTCAATCAGAAAAGCTCGATTCCTGGGAAAATCCCATCTGGGCTTTTCAATGCCATGTTTGGATTTGAGAGTGGATCATGGGCAAGTGATGCTGCTAACACAAAGTTCTTGGGTCTTGATGGGTACTTCATCACACTTTTCAATGTTCATATTGATAGGTATCCTCTTCTTCTGTCCAAACAAGTACTTAAAGATGTTCCTTCTTCCTGGGATCCTCTTGCACTTTCCagGTTTATTGAGAAGTACGGGACTCACATCCTTGTGGGTCTTAGCATTGGTGGCAAAGACGTGGCTCTAGTGAAGCAAGATGTGTCTTCCAATTTAGAGCCATCAGAGCTTAAGAAGCACTTGGATGAGCTCGGTGATCAGTTATTTACAGGGGCATGCAATTTCTATCCCAAACCCAAAGAGCACAAATACAAGGCACCACAGGCTTTTGATGTCTTCGGCTCACAAAATGTTTCCTACATCAACAACTCCACATCTGTTTGTTCAAAGGATGGAATTACAGTGATATGTTCAAGGAGGGGAGGAGATACTCTAGTGAGCAGCCATTCTGAATGGCTTCTAACAGTTCCTCATAATCCTGATGCTGTTCATTTCAGCTTCATTCCCATTACTTCTCTTCTTAAAGCTGCTCCTGGCAGAGGATTCCTATCCCATGCTATCAACCTCTACCTTAGATATAAACCTCCTATATCAGATTTGGCATACTTTCTTGACTTCCAATCACACAAGATTTGGGCCCCCATTCACCATGACCTCCCTCTAGGTCTCACAAATAGAACTATTCCTTCACCTTCTCTAAGCTTCCAGTTCATGGGTCCTAAGCTTTATGTAAATACTGCTAAGGTAACAGTTGATCAAAGGCCAGTTATAGGAATGCGCTTATTTCTGGAGGGCATGAGAAGCAACAGATTAGCCATACACCTGCAACATCTACTGAACACTCCAACCATGCTTGTGGACACAATAGAGGACACAACAATATGGTCAGAAGAAATCAACGATGACAAGTTTTTCGAGGCGATATCTGGGAAAAAATTCTCCCATATATGCACCGCGCCGGTGAAGTACAACCCTACATGGAGGAATCGTGGGAAAGAAGAGGCATTTATTGTGACAGGAGCACAACTTCATGTGAAGAAGTATGATTCAAAAAGTGTCCTCCATCTTAGGCTGTTGTTCTCTAAGGTATCTAACTCTTTTATTGTACAGTCAAATTGGGCATGTAATCCCTCTGAGTTTTCTCAGAAGTCTGGGATCTTCTCGGCCTTAATAAGCACATCAATTTCtagtaaagagaaaaagccAACTGTAGTTGTAGATTCAAGTGTGTTTCCAAATGAGCCACCAGTGCCTGTGCAGACACAGAAGATGTTGAAATTTGTTGATATGTCAGAGTTATGTAGAGGCCCACAAGATAGTCCTGGTCATTGGTTGGTTACTGGGGCAAGGTTGGTCTTGGAGAAAGCTAAGATATGTTTAAgggtaaaattttctttgttgaataCTGtttcatg 1772 0.417 MGEGIVKRALESLGKGFDLTSDFRLKFCKGEDRLVLLNEAERRELEVPGFGPVKDVSVDIKCDKGERTRHQPDILTFNQMSESFNQKSSIPGKIPSGLFNAMFGFESGSWASDAANTKFLGLDGYFITLFNVHIDRYPLLLSKQVLKDVPSSWDPLALSRFIEKYGTHILVGLSIGGKDVALVKQDVSSNLEPSELKKHLDELGDQLFTGACNFYPKPKEHKYKAPQAFDVFGSQNVSYINNSTSVCSKDGITVICSRRGGDTLVSSHSEWLLTVPHNPDAVHFSFIPITSLLKAAPGRGFLSHAINLYLRYKPPISDLAYFLDFQSHKIWAPIHHDLPLGLTNRTIPSPSLSFQFMGPKLYVNTAKVTVDQRPVIGMRLFLEGMRSNRLAIHLQHLLNTPTMLVDTIEDTTIWSEEINDDKFFEAISGKKFSHICTAPVKYNPTWRNRGKEEAFIVTGAQLHVKKYDSKSVLHLRLLFSKVSNSFIVQSNWACNPSEFSQKSGIFSALISTSISSKEKKPTVVVDSSVFPNEPPVPVQTQKMLKFVDMSELCRGPQDSPGHWLVTGARLVLEKAKICLRVKFSLLNTVS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01454 590 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 323 IPR020864 -
Bva01g01454 590 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 4 588 IPR044663 GO:0006952|GO:0012501|GO:2000031
Bva01g01454 590 PANTHER OS02G0736300 PROTEIN 4 588 - -
Bva01g01454 590 SMART MACPF_8 125 311 IPR020864 -
Bva01g01454 590 Pfam MAC/Perforin domain 98 309 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01454 Bva-Chr1 16049283 16056771 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01454 01 16049283 16056771 Bva01g01454 01 16049283 16056771 ECH