Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01429 ATGTCGGCCCAAGAGGTCCAAACTGATCAACGTCTTGAAGCAGTCCCCCAGTCTACAAGTCCTCAAAATTTGACCATCCATGTTTCAGATaTAAGAACTGTTAAGGTTAACAATATATCAGCTAATGCTTCTGAGTGTGACATAAGAGAGTTCTTTTCATTCTGTGGTGATATTCGATATATTGAGACACAAAGAGAAACTGAGAACACCAAGGTGGCTTATGTTACCTTCAAGGCTTCACAAGGAGTAGACACAGCATTGCTATTGACGGGTTCCAGGATAGTTGACCTTTGTGTCACAATATCACCTGCTGAGAACTACCAGCTTCCCCCTGAAGCTCTTCCCATGAGCCCGGTGAAAAATCAACCTGCAGGAGGCTCTGCAGTTAAGAGGACTGAAGATGTTGTAAGCACAATGCTAGCCAAGGGTTACATTCTGGGAAAAGATGCACTCAACATGGCGAAATCCTTCGACGAACGCCATCACTTAACCACAAATGCATCTGCCACGGTTGCTTCTATTGATCACAAAATGGGCTTAACTGACAAACTAAGCATTGGGACAGCCATGCTTAATGAAAAGGTGAGAGCAATGGATGAAAAGTACCAGGTTTCGGAGAAGACCAGGTCTGCTTATGCTGTTGCTGAGCAGAAGGCGACCAGTGCTGGATCTGCTATCATGAGCAATCCCTATGTGTCGACGGGAGCTCAATGGGTGTCGAATGCGTTTACGGCTGTGGCAAAGGCTGCTGAGGATGTTAGTGTGATGACTAAGGAGAAGGTTGAACAGGCTGAGGTGGAAAAGAAGGATCTTATTTGTTCTGACAAGACAAAGATTAGTGATGAATTTGAGAAGACGTCGTCGTCTGACGAGGACTCGCCGAAGGATCCTGCGGTAGTTCCTGTTAAATCTGATGATCCCAAGGATTCTGCTGTGGTACCTGTTAACTCTAATGATCCCAAGGATCCTGCGGTGGTTCCTGTTAAATCTGATGATCCCAAGGATCCTGCGGTGGTTCCTGTTAAATCTAATAATGAACATAAGCTGTG 1049 0.4538 MSAQEVQTDQRLEAVPQSTSPQNLTIHVSDIRTVKVNNISANASECDIREFFSFCGDIRYIETQRETENTKVAYVTFKASQGVDTALLLTGSRIVDLCVTISPAENYQLPPEALPMSPVKNQPAGGSAVKRTEDVVSTMLAKGYILGKDALNMAKSFDERHHLTTNASATVASIDHKMGLTDKLSIGTAMLNEKVRAMDEKYQVSEKTRSAYAVAEQKATSAGSAIMSNPYVSTGAQWVSNAFTAVAKAAEDVSVMTKEKVEQAEVEKKDLICSDKTKISDEFEKTSSSDEDSPKDPAVVPVKSDDPKDSAVVPVNSNDPKDPAVVPVKSDDPKDPAVVPVKSNNEHKL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01429 349 MobiDBLite consensus disorder prediction 281 303 - -
Bva01g01429 349 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 10 308 - -
Bva01g01429 349 Gene3D - 28 101 IPR012677 -
Bva01g01429 349 SUPERFAMILY RNA-binding domain, RBD 19 110 IPR035979 GO:0003676
Bva01g01429 349 SMART rrm1_1 33 102 IPR000504 GO:0003723
Bva01g01429 349 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 10 308 - -
Bva01g01429 349 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Bva01g01429 349 MobiDBLite consensus disorder prediction 281 349 - -
Bva01g01429 349 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 91 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01429 Bva-Chr1 15785482 15790462 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01429 01 15785482 15790462 Bva01g01429 01 15785482 15790462 ECH