Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01427 ATGGTGGGGCATGAGATTTTATCAGAGGAAAATAATACAGATTGGCTTAATACTCTTCTGCATAGTAGCTTTCGCAAATGTAAGGATCATAGAGATCTTCGGTATAGTGATAAGAATGTGTTCTGTATAGACTGTACACTTCGCTTGTGTAAGCATTGCAAGGAAGCTCATTCACTCCATAGAAGGTTGCAGATATACAGATATGTTTATCAAGATGTCGTTCGCCTTTCTGACCTGCAGAAGCATTTTGATTGCTCAAAAATTCAGACATATATATCTAACAATGAAAGGATTATACATCTCCATCCGCGGCCTGCATTGGACGATACCAACCCAACAAGAAGATCTAAATGTGGTGATCATTGTCCTAAGCCTCAATTCAAAGTTACAAAGCTATCGTCAAGATTAAAGTCTGGTGGTGCTTGTGAAGAATGTGGAAGAAATTTACAAGATGAGCGTAATCGCTTCTGTTCTATTGCATGCAAGATCTCAGTTGTTTCAATGGAGGAGCTCCATGGCAACCAGAATTCTGAACGAACTTCAGAAGGGCCTGTAAATCAATGTGCTAAACTGATCACCACTCAAAAGCCTGAAGTTTTAGGCCCTTCTTTGAACGATGATAACCAGAATTCAGAAACTGAGTCATCTATATCTGTGGCTGAATCAGATGATAGGTTTGAGCTTATGAATTTCAGAAAGCGCCCAAGAAAAGGCCTCCCTCAGAGATCTCCTTTTCTATGTATGTCTTA 749 0.3965 MVGHEILSEENNTDWLNTLLHSSFRKCKDHRDLRYSDKNVFCIDCTLRLCKHCKEAHSLHRRLQIYRYVYQDVVRLSDLQKHFDCSKIQTYISNNERIIHLHPRPALDDTNPTRRSKCGDHCPKPQFKVTKLSSRLKSGGACEECGRNLQDERNRFCSIACKISVVSMEELHGNQNSERTSEGPVNQCAKLITTQKPEVLGPSLNDDNQNSETESSISVAESDDRFELMNFRKRPRKGLPQRSPFLCMS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01427 249 MobiDBLite consensus disorder prediction 194 217 - -
Bva01g01427 249 MobiDBLite consensus disorder prediction 194 220 - -
Bva01g01427 249 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Bva01g01427 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 245 - -
Bva01g01427 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 245 - -
Bva01g01427 249 Pfam PLATZ transcription factor 67 163 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01427 Bva-Chr1 15774047 15776223 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Bva01g01427 PLATZ 6.5e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01427 01 15774047 15776223 Bva01g01427 01 15774047 15776223 ECH