Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01424 ATGGCTCTCTGCTTcagcttcatcttcttcttcctctgcaaCTTTTCCCATTCTTCCATTGCCCAGCATCTCAATTTCACCTCCTTCAACATCTCAAACTCCCCATGGAAACCAACCCAGAACCGCATTCTTCTTTCTCAGAACTCTAAGTTCTCTGCTGGGTTCCTCCCCGGATCCAATTCTCGCACCCAATTCAAATTCTCTGTCTGGTTCACTAAGGCCCCTTCAGATGCTGTTGTTTGGTCTGCAAGTTCCAAGGCCAAGCCCTCTGCTGCCATTGTCTTTGACAGCTCTGCTTCTCTCACCATCAATTCCACAGGCCAGCTTCTCATCAATGATTCTTCGGGGAACCAATGGACCCCGGGAAACTCTTCAACCAATTCGAGTTCTGCAACTCTCATTCTCAACGACAATGGAAATTTGAAGTTTGGGACTTGGGAAAGCTTTCGTTTTCCAACAAACACATTTCTCCCCAACCAGAGCATCGATACCCAGATAAAGATATTCTCCCAAAATGGGAAATTCAAGTTCGAAAATTCTTCGAATTTGGTCCTCAGTTCCACCTCTGATCAGTACTATAAAACACCCTGGGGTCTTAAGAGCATGGATGAAGATGGGAAGATAGAAATGGAGAATAACTTCTTCCTCACTTCGGATTTCGGCGATAAGCGGTTTCGAAAACTCGTGCTTGATGACGATGGCAACTTGAGAATCTACAGTTTCTACCCAGAAGAGCAAAACCATTGGAAAGTTGTGTGGGTAGCAATCCAACAACAATGCGAAATCAAAGGAAAATGTGGAGAAAATGCTATCTGCATGCCTGAAGAAGACGCTTACAGTTCTACCTACTGCGTTTGCCCATCTGGGTTCATCGAAAATCCAGGTGGGGCAGAGCAAGAAGGATGCGAGAGACGATTCAAGCTAACCACCAACACCAAGTTTCTTCGCTTAGATTATGTCAATTTCACCAGCAAATTCGacaagatgaagaaaattgaCGCCAGAAACTTCACATTCTGCGAAGCTACGTGCAAATCAAACCCGAAATGTCTCGGGTTTGGATTCAAATACGATGGATCTGCTTATTGCGTTGTCCTGGAGCAGCTTCTATATGGGTATTGGTCTCCGGGTACAGAAACTGCGCTATACCTGAAAGTTGATGTATCTGAAAAAGAAAGCTCGAATTTCACCGGCATGACGGAGATACTGGAAACGACGTGCCCGGTTCAAATCAGCCTCCCTCAGCCGCCGAAAGATTCAAATACCACCACACGGAACATTGTGATAATCTGTACCCTTTTCGCCGCCGAGCTCATTTCCGGTGTTGCTTTCTTCTGGTCTTTCCTCAAGAGGTACATCAAGTACAGAGACATGGCTACGACTCTGGGTCTTGAGCTTCTCCCCGCCGGTGGCCCGAAACGTTTCTCGTATGCTGAGCTCAAAACCGCCACCAATGACTTCTCCAATCTCATTGGAAAAGGTGGGTTCGGGGATGTTTATAAAGGGGAGTTGCCGGACCACCGTATCGTCGCCGTGAAGTGCCTGAAGAATGTCACCGGCGGAGACGCCGAGTTCTGGGCGGAGGTCACCATCATTGCCAGAATGCACCACCTAAACTTGGTTCGCCTGTGGGGTTTCTGTGCGGAGAAAGGCCAAAGAATCCTGGTTTACGAGTATGTTTCGGGTGGATCACTGGACAAGTACTTGTTCCGATCTCGCCGGGTTGTACCCGTTAAGAGCAgtgaagaacaagaagaaggaGCAACACCGGGTCATGATCCGGCTCCAGTTCCAGATCCGAATACTGAGCAAAAACCCATTCTTGATTGGAATGTGAGGTACAGGATTGCTCTCGGAGTTGCAAGGGCTATTGCCTATTTGCATGAGGAGTGTTTAGAATGGGTTTTACATTGCGATATTAaaccagaaaatatattacttgGAGATGACTTTTGTCCTaaaatatcagattttggATTAGCCAAACttcgaaaaaaagaagatatggTGACTATATCCCGGAGACGAGGAACACCGGGTTATATGGCTCCAGAATGGATTACCACTGATCCAATCACCTCGAAAGCTGACGTATATAGTTTTGGGATGGTCTTATTAGAGCTAGTGACCGGAATTAGGAACTTTGAGATTCAAGGATCTGATATGAATAGTGATGAATGGTATTTTCCTGGTTGGGCATTTGATAAAATGTTTAAGGAGATGAAGGTAGAAGATATTTTGGACACTCAAATCAAGCATTGTTATGATAGTAGGTCTCACCTTGATTTGGTGACTAGAATGGTGAAGACATCAATGTGGTGCCTTCAAGATAGACCTGAGTTGAGGCCAACCATGGGCAAGGTGGCTAAGATGTTGGAAGGCACTGTAGAGATGATTGAGCCTAAGAAGCCCACAGTGTTTTTCCTTGGTGGTGAATA 2438 0.4401 MALCFSFIFFFLCNFSHSSIAQHLNFTSFNISNSPWKPTQNRILLSQNSKFSAGFLPGSNSRTQFKFSVWFTKAPSDAVVWSASSKAKPSAAIVFDSSASLTINSTGQLLINDSSGNQWTPGNSSTNSSSATLILNDNGNLKFGTWESFRFPTNTFLPNQSIDTQIKIFSQNGKFKFENSSNLVLSSTSDQYYKTPWGLKSMDEDGKIEMENNFFLTSDFGDKRFRKLVLDDDGNLRIYSFYPEEQNHWKVVWVAIQQQCEIKGKCGENAICMPEEDAYSSTYCVCPSGFIENPGGAEQEGCERRFKLTTNTKFLRLDYVNFTSKFDKMKKIDARNFTFCEATCKSNPKCLGFGFKYDGSAYCVVLEQLLYGYWSPGTETALYLKVDVSEKESSNFTGMTEILETTCPVQISLPQPPKDSNTTTRNIVIICTLFAAELISGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFSYAELKTATNDFSNLIGKGGFGDVYKGELPDHRIVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYVSGGSLDKYLFRSRRVVPVKSSEEQEEGATPGHDPAPVPDPNTEQKPILDWNVRYRIALGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTISRRRGTPGYMAPEWITTDPITSKADVYSFGMVLLELVTGIRNFEIQGSDMNSDEWYFPGWAFDKMFKEMKVEDILDTQIKHCYDSRSHLDLVTRMVKTSMWCLQDRPELRPTMGKVAKMLEGTVEMIEPKKPTVFFLGGE 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01424 812 CDD STKc_IRAK 491 794 - -
Bva01g01424 812 Gene3D - 155 259 IPR036426 -
Bva01g01424 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 166 IPR036426 -
Bva01g01424 812 ProSiteProfiles Protein kinase domain profile. 485 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01424 812 MobiDBLite consensus disorder prediction 580 602 - -
Bva01g01424 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 144 249 IPR036426 -
Bva01g01424 812 ProSiteProfiles Bulb-type lectin domain profile. 29 156 IPR001480 -
Bva01g01424 812 Gene3D Transferase(Phosphotransferase) domain 1 599 804 - -
Bva01g01424 812 Gene3D - 34 154 IPR036426 -
Bva01g01424 812 ProSiteProfiles PAN/Apple domain profile. 302 393 IPR003609 -
Bva01g01424 812 ProSitePatterns Protein kinases ATP-binding region signature. 491 513 IPR017441 GO:0005524
Bva01g01424 812 SMART serkin_6 485 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01424 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Bva01g01424 812 Pfam S-locus glycoprotein domain 221 291 IPR000858 GO:0048544
Bva01g01424 812 SUPERFAMILY Protein kinase-like (PK-like) 467 793 IPR011009 -
Bva01g01424 812 Pfam D-mannose binding lectin 93 165 IPR001480 -
Bva01g01424 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Bva01g01424 812 Pfam Protein kinase domain 489 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01424 812 Gene3D Phosphorylase Kinase; domain 1 459 559 - -
Bva01g01424 812 PANTHER OS07G0415500 PROTEIN 7 810 - -
Bva01g01424 812 PANTHER OS10G0101000 PROTEIN 7 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01424 Bva-Chr1 15754299 15756737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01424 397 804 Receptor kinase-like Gene Family AT4G18250 35.934 1.14e-74 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva01g01424 Pkinase 1.6e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01424 01 15754299 15756737 Bva01g01424 01 15754299 15756737 ECH