Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01402 ATGATGACACcaaatttgaactttgaacCGGAAAATAATTCAGAAGGCAGCAGTCAGGTAGCCACCACTGTCTCCGTGCAGGACACACCCTGCGATCGCGCCAAAGACAGCACAACCACTTCTTCCAGTCTCTCAAAGTCTGAACCTGATCAAGGGCCTGTCTCCCTTGACTTAACACTCAACTTCTACTCTAGCGATGGCGAATTGAAGGGCACAAATGATGCTAACAGTGAAGTAGGAGCTGATGCTCATCCTTCAGGAACAACTATTCCAAGGGTTTTCTGTTGTAATTACTGTAGGAGAAAGTTCTACAGCTCGCAGGCATTAGGCGGCCATCAGAATGCTCATAAAAGGGAGAGAACAATGGCAAAGCGTGCAATGCGAATGGGGATGTTCACTGACATGTGCACCAGCTTGGCATCTCTCCCTCTTCATGGTTCTGCTTTTAGGTCTCTTGGCGTTGAGGCTCATTCTGCAATGCACCAAAGACATGTGCCATCATCACAGATGGCTCCTGATATGAGAGCTGCAGCAAAATTTCAGAAGGACTATTTTGGGACACCAGTGTTcatggaagatgatgatgttGGTCTGGTTTGGCCCGGGAGTTTCCGGCAGGTAGACACGGGTTCTAGTATTAACACGGGACATGAACATGTTCAAAGTTCGAGCCCTAATAATGTAGCATTGCCAATGGCATCTTCACCACAAACATCTTCATCTCTTGATCTGACTCTGAAGCTCTG 746 0.4544 MMTPNLNFEPENNSEGSSQVATTVSVQDTPCDRAKDSTTTSSSLSKSEPDQGPVSLDLTLNFYSSDGELKGTNDANSEVGADAHPSGTTIPRVFCCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGMFTDMCTSLASLPLHGSAFRSLGVEAHSAMHQRHVPSSQMAPDMRAAAKFQKDYFGTPVFMEDDDVGLVWPGSFRQVDTGSSINTGHEHVQSSSPNNVALPMASSPQTSSSLDLTLKL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01402 248 Gene3D Classic Zinc Finger 81 137 - -
Bva01g01402 248 MobiDBLite consensus disorder prediction 1 57 - -
Bva01g01402 248 ProSitePatterns Zinc finger C2H2 type domain signature. 95 116 IPR013087 -
Bva01g01402 248 PANTHER ZINC FINGER PROTEIN 3-RELATED 6 248 - -
Bva01g01402 248 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Bva01g01402 248 MobiDBLite consensus disorder prediction 210 248 - -
Bva01g01402 248 PANTHER ZINC FINGER PROTEIN JAGGED 6 248 IPR045320 GO:0003700
Bva01g01402 248 SUPERFAMILY beta-beta-alpha zinc fingers 92 122 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01402 Bva-Chr1 15351875 15355918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01402 92 248 C2H2 Transcription Factor Family AT1G66140 45.304 1.82e-42 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01402 01 15351875 15355918 Bva01g01402 01 15351875 15355918 ECH