Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01396 ATGGCCGCTACACAACTCTGTCAAGCTTCCCTCGTTCAACCCAACATTTCAATTTCTCGCCGAACCCAGCAGTTTTGCCGCCAAGCAAATAGTCTACGATATCAATCTGCAAGCTCAAATGTACGTTTTCTGGTACAAAGGAAAAATGGGTTTGTGCCAAAAGCTGCAGCTTTGGAGTCTGATGTGAAATCTTCTCCAGTTGCAGCAAGAAACACCAACAATCCAATCATCGTTATTGATAACTATGATAGCTTTACCTATAACCTTTGCCAGTATATGGGAGAGTTGGGATTTCACTTTGAGGTCTACCGAAATGATGAGTTGACTGTGGAGGAGTTGAAAAGGAAGAATCCTAGAGGAGTACTAATATCACCAGGCCCAGGTGCACCTCAAGATTCTGGCATATCTTTGCAAACTGTTTTGGAACTTGGGCCGACTGTACCCTTATTTGGCGTTTGCATGGGCTTGCAGTGCATTGGAGAGGCTTTTGGGGGGAAGATTGTGCGTTCTCCTTACGGTGTCATGCATGGAAAAAGTTCTCTGGTGTATTATGATGAGAAGGGAGAGGATGGATTATTTGCTGGATTATCAAATCCTTTCACTGCTGGTAGATATCACAGCCTTGTCATTGAAAAGGAGAGTTTTCCTCATGAAGAACTTGAGGTAACAGCCTGGACAGAGGATGGTCTTATAATGGCTGCCCGTCACAAGAGATACAGGCATCTACAGGGAGTTCAATTCCATCCAGAGAGCATTATAACCACCGAAGGGAAGACGATtgtccgaaactttgtcaagCTTATAGAGAAGGAGGAGGCTGGTGGCTCATG 830 0.4373 MAATQLCQASLVQPNISISRRTQQFCRQANSLRYQSASSNVRFLVQRKNGFVPKAAALESDVKSSPVAARNTNNPIIVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPYGVMHGKSSLVYYDEKGEDGLFAGLSNPFTAGRYHSLVIEKESFPHEELEVTAWTEDGLIMAARHKRYRHLQGVQFHPESIITTEGKTIVRNFVKLIEKEEAGGS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01396 276 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 118 132 - -
Bva01g01396 276 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 148 164 - -
Bva01g01396 276 PRINTS Anthranilate synthase component II signature 174 182 - -
Bva01g01396 276 PRINTS Anthranilate synthase component II signature 148 159 - -
Bva01g01396 276 PRINTS Anthranilate synthase component II signature 197 209 - -
Bva01g01396 276 PRINTS Anthranilate synthase component II signature 121 130 - -
Bva01g01396 276 PRINTS Anthranilate synthase component II signature 244 257 - -
Bva01g01396 276 PRINTS Anthranilate synthase component II signature 76 90 - -
Bva01g01396 276 Pfam Glutamine amidotransferase class-I 78 265 IPR017926 -
Bva01g01396 276 SUPERFAMILY Class I glutamine amidotransferase-like 76 270 IPR029062 -
Bva01g01396 276 PRINTS Glutamine amidotransferase superfamily signature 121 130 - -
Bva01g01396 276 PRINTS Glutamine amidotransferase superfamily signature 244 257 - -
Bva01g01396 276 PRINTS Glutamine amidotransferase superfamily signature 148 159 - -
Bva01g01396 276 Gene3D - 74 267 IPR029062 -
Bva01g01396 276 TIGRFAM trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 76 266 IPR006221 -
Bva01g01396 276 CDD GATase1_Anthranilate_Synthase 76 265 IPR006221 -
Bva01g01396 276 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 75 274 - -
Bva01g01396 276 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 1 273 - -
Bva01g01396 276 PANTHER ANTHRANILATE SYNTHASE BETA SUBUNIT 1, CHLOROPLASTIC 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01396 Bva-Chr1 15280913 15284581 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01396 01 15280913 15284581 Bva01g01396 01 15280913 15284581 ECH