Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01387 ATGCcttcaaaacaaagagaaGTCATGTGGCCTAGTTTAGTGGCTAGTAAGATACTCAAGAAACGACTTGGAAGCAACAATTTTGTAGCAGATTATCCAAGCATCACAGAGCCCATATTTGAATTTACAAGCATTGATCAGTCAACTCCGAGTTCTAATATTCTTCAACATCACAAGGACACTAAAAAGTACAAAGTTTTTGTTAGCACATGGAACATCGGCGGAATTGCACCAGAAGAAGATTTGAACCTAGAGGATTTGCTGGAGACAAGCAACACTCCTTGTGACATCTATGTACTCGGGTTTCAAGAAATAGTGCCTCTACAAGCATCAAATGTCTTAGGATCTGAGAATAGTAAGATTTGCATGATGTGGAATTCCTTAACCAGAGTAGCCTTAAACAAGATATCGCGAAACGGGGACAAAGATTTTCCAGATGCTAAAATGGATGAGATGAATAATAGTTTTCCCAATAAGGAGGAAAATAATCCAACTCATTACCTTCAAGGCCCACAAGATTATCAGTGTATCATTAGCAAGCAAATGGTTGGTATTTTGATATCTGTGTGGGTTAGGAGTGATCTTCGTCCATTCATTCGCCATCAGAGCGTGTCTTGCATAGGCTGCGGTGTCATGGGCTGCTTAGGAAACAAGGGTTCTGTCTCTGTGAGATTCAAGTTACATGAAACAAGCTTCTGCTTTGTCTGTAGTCATCTAGCTTCCGGTGGCCGCGAGGGTGACGAAAAGTATAGGAACTCTAATGTGGCTGAAATATTTTCCAGGACAAGCTTTCCTAGAGGCCCTCTTCTTGATTTGCCAAGAAAGATTCTTGATCATGAGTATGTGATATTGCTTGGagatttaaattatagaatttcaCTACCAGAAGAAACGACTCGCTTACTGGTTGAACAAAGAGATTGGGATTCCTTAATAGAAAGTGATCAGCTAAGGATGGAGCTAATGAATGGAAATTTGTTAAGAGGGTGGAATGAAGAAGCAATCAAATTTGCTCCTACCTACAAGTACTATCCTAATTCAGATGTATACTATGGATGTTGTTACCAAGGAGACAGGACACAAAAGAGGCGAGCACCTGCATGGTGTGATCGGATAATATGGTATGGCAAGGGACTAAAGCAACTTCAGTATAGTAGAAGTGAATCAAAGCTCTCAGACCACAGGCCGGTGAAAGCAATATTCACATCAGATGTTAGGGTTTCACAATTAGCACTAAAGAATCTGCAGAGTCTATTTCTATCAGAGAGATTTGAGAACCTTAAAAGCCACATAGAAGTTTCATCCAACGACAAGTTTCTACGTAAAAAGTACTCAAGCTTCCGATTATA 1349 0.3936 MPSKQREVMWPSLVASKILKKRLGSNNFVADYPSITEPIFEFTSIDQSTPSSNILQHHKDTKKYKVFVSTWNIGGIAPEEDLNLEDLLETSNTPCDIYVLGFQEIVPLQASNVLGSENSKICMMWNSLTRVALNKISRNGDKDFPDAKMDEMNNSFPNKEENNPTHYLQGPQDYQCIISKQMVGILISVWVRSDLRPFIRHQSVSCIGCGVMGCLGNKGSVSVRFKLHETSFCFVCSHLASGGREGDEKYRNSNVAEIFSRTSFPRGPLLDLPRKILDHEYVILLGDLNYRISLPEETTRLLVEQRDWDSLIESDQLRMELMNGNLLRGWNEEAIKFAPTYKYYPNSDVYYGCCYQGDRTQKRRAPAWCDRIIWYGKGLKQLQYSRSESKLSDHRPVKAIFTSDVRVSQLALKNLQSLFLSERFENLKSHIEVSSNDKFLRKKYSSFRL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01387 449 SUPERFAMILY DNase I-like 61 406 IPR036691 -
Bva01g01387 449 SMART i5p_5 62 409 IPR000300 GO:0016791|GO:0046856
Bva01g01387 449 Gene3D Endonuclease/exonuclease/phosphatase 48 431 IPR036691 -
Bva01g01387 449 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 13 428 IPR045849 GO:0004445|GO:0046855
Bva01g01387 449 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 13 428 - -
Bva01g01387 449 Pfam Endonuclease/Exonuclease/phosphatase family 70 394 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01387 Bva-Chr1 15206223 15209271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01387 50 405 Acyl Lipid Metabolism Gene Families AT1G65580 27.407 1.48e-35 138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01387 01 15206223 15209271 Bva01g01387 01 15206223 15209271 ECH