Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01345 ATGAAGCTTTGGAAAAGGGCCACCGGAGTTCTCAAGGACAAAACCAGCCTATGGATTGCCAAGCTTTCCCGGAAAACACCGTACCGGAATCCTATCCTCGAGGCGGCGATCATCAAGGCAACGAGCCACGATGAAGACCACCTTGATTACAAGAACTTACAGAGGGTGTTCCAATGGGTACGCGCCAATCCATTACACCTCAAGCCTCTGGCTTGGGCTCTGGCAGTGCGTATGGAGAAGACGAGAAATTGGGTGGTGGCCCTTAAAGGCTTAATGCTTTACCATGGAGTTCTTTGTTGTGATATCCCAAAGGTGCAAGGGGTTGGAAAATTACCCTTTGATCTTTCAAATTTCAGCGATGGGCATTCAAGATCAGAGACAACATGGGGTTTCACTGTCTTTGTTCGTGCCTATTTCGCCTATTTAGACCAAAGGTCAGCCTTTGTGGCTTCAGAAGTGAGAAAACATAGCAAGAAAATCAGACAAGGGAAGCTGAAGGTTGAAGACACATTGATGGAAGAGCTTGAGAGACTGCAGAAAATGCAGGGCTTAATTGACATGCTGCTTCAAATCAGGCCTCAGAACCAGAAAATGGAATGTTCTGGTCTTATGCTTGAAGCCATGGATTGTGTTATAGTTGAGGCTTTTGATTTGTATGGTAAAATTTACAAAGCCATTGAAAGAGTGCTCTTGAAGATTTATCATGTTGGTGGGAAGATGGAAGCAAGTATTGCCCTCAAGGTTCTGAAGAAAGCAGCACTTCAAGGTGATGAACTCTCTTCCTATTTTGAGTATTGCAGGGACCTCGGTGTTCTTAATGCCTCTCGATGCCCGAAAATCGAGCAAATCCCTGGCGAAGATATTCGAGATCTTGAGAGGATAATCAACAATGGAGCAACCCAGAAGAAAGATCATAgtgataatgatgatgatgagaagAAGAGGTTTGTGGAAAGAGACAACAATACCATTATTGCCACCATCGATAAACAAAGTGAATCTCAAGAGAAATGGTTGAAGACGGTGATTACAGATAAATGGGAGGTGTTTGAAGAGGATTGTTTGGTTGATGCAAAGGAATTTCCCTCTAATGGGTTAAAAATTGCTGCTTCAACAAACCCTTTTGATGATTTGTATAGCTTAATAACCtatcctcctcctcctcctcctgcTGCTTGTAGTCAAGTTCTTCCAgatttgattagtttttattg 1214 0.4102 MKLWKRATGVLKDKTSLWIAKLSRKTPYRNPILEAAIIKATSHDEDHLDYKNLQRVFQWVRANPLHLKPLAWALAVRMEKTRNWVVALKGLMLYHGVLCCDIPKVQGVGKLPFDLSNFSDGHSRSETTWGFTVFVRAYFAYLDQRSAFVASEVRKHSKKIRQGKLKVEDTLMEELERLQKMQGLIDMLLQIRPQNQKMECSGLMLEAMDCVIVEAFDLYGKIYKAIERVLLKIYHVGGKMEASIALKVLKKAALQGDELSSYFEYCRDLGVLNASRCPKIEQIPGEDIRDLERIINNGATQKKDHSDNDDDEKKRFVERDNNTIIATIDKQSESQEKWLKTVITDKWEVFEEDCLVDAKEFPSNGLKIAASTNPFDDLYSLITYPPPPPPAACSQVLPDLISFY 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01345 404 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Bva01g01345 404 CDD ANTH_N_AP180_plant 33 148 - -
Bva01g01345 404 PANTHER OS08G0467300 PROTEIN 1 361 - -
Bva01g01345 404 Pfam ANTH domain 33 296 IPR011417 GO:0005543
Bva01g01345 404 SUPERFAMILY ENTH/VHS domain 33 148 IPR008942 -
Bva01g01345 404 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 361 IPR045192 GO:0048268|GO:0072583
Bva01g01345 404 Gene3D ANTH domain 154 315 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Bva01g01345 404 Gene3D - 4 152 IPR008942 -
Bva01g01345 404 SUPERFAMILY GAT-like domain 173 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01345 Bva-Chr1 14626448 14627750 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01345 01 14626448 14627750 Bva01g01345 01 14626448 14627750 ECH