Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01344 ATGGATGATGATGCGTTGAACATGCGCAATTGGGGTTACTATGAGCCCTCCTTCAAAGGCCATCTTGGCCTGCAGCTCATGTCTAGTATGACAGATCGCGACATAAAACCATATTTGTCTGGTCGTGATCCAACCATGTTAGTTGGAGCAAATGGAGCCTTTCATCCTCGTGATTGTGTTGTTTCAGAACCACCAATTCCAATGAACTATATGAGAGACAGTTGGATAAGTCCGAGAGATAAGTATGTCAACTTGTTTTCTGCAAATCCTAACTATGCTGTTCTTCCGGAGACATCGGGAGCTCCCTCGATGCAAATTATACAGCCACCTGATACATCAAAAGATGAGAGGGTGAATAGGATTGAAGAACCACCAAATGTAAAAAAGGATGCTAGTCAATCGAAGAAAAGGCAAGGTGGCAGTGCTCCTAAGATTCCAAAAGCCAAAAAACCTAGGAAGCCAAAGGATAATAGCAATTCAACTGTTCAACGTGTGAAGCCACCAAAGAAGACTATGGAGCTTGTGATAAATGGAATTGATATGGACATTTCTGGTCTACCCATTCCAGTCTGCTCTTGTACTGGGACTTCTCAGCAGTGCTATCGATGGGGCTGCGGTGGTTGGCAATCAGCTTGTTGTACGACAAATGTGTCAATGTATCCTTTGCCAATGAGCACTAAAAGACGCGGTGCAAGGATAGCTGGACGGAAGATGAGTCAAGGTGCTTTTAAGAAGGTTTTAGAGAAACTTGCAGCAGAAGGTTATAATTTTGCTCAACCTATTGATCTGAGGACTCACTGGGCAAGACATGGCACCAACAAGTTTGTGACTATCAGGTA 839 0.4374 MDDDALNMRNWGYYEPSFKGHLGLQLMSSMTDRDIKPYLSGRDPTMLVGANGAFHPRDCVVSEPPIPMNYMRDSWISPRDKYVNLFSANPNYAVLPETSGAPSMQIIQPPDTSKDERVNRIEEPPNVKKDASQSKKRQGGSAPKIPKAKKPRKPKDNSNSTVQRVKPPKKTMELVINGIDMDISGLPIPVCSCTGTSQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFAQPIDLRTHWARHGTNKFVTIR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01344 279 SMART GAGA_bind_2 1 279 IPR010409 -
Bva01g01344 279 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 279 - -
Bva01g01344 279 Pfam GAGA binding protein-like family 1 279 IPR010409 -
Bva01g01344 279 PANTHER - 1 279 IPR010409 -
Bva01g01344 279 MobiDBLite consensus disorder prediction 113 135 - -
Bva01g01344 279 MobiDBLite consensus disorder prediction 97 112 - -
Bva01g01344 279 MobiDBLite consensus disorder prediction 97 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01344 Bva-Chr1 14622275 14624366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01344 1 279 BBR or BPC Transcription factor family AT2G01930 58.923 2.54e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bva01g01344 GAGA_bind 8.3e-112 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01344 01 14622275 14624366 Bva01g01344 01 14622275 14624366 ECH