Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01442 TTTCTTTCTTGTACCCAGAACAAGCTTCTCTATATATTTCGCATATTCAGAGAAGAAAAATACCCAGAACGGGAAAACCAATCAATCATCTTTACCCTGTGGACTGGAAATCACCGAGAAAATAAAATGAGAGGGTATTTTCAGGGATTGCTCTTGTTTGGGTCTCTGCTTTTTGTTCTTGCTTCTGGGTCATCAAGAAATTTGCCCATCATAGCTTTTGATGAAGGCTACGCACCCTTGTTTGGGGATAATAATTTGGTCATACACAGGGATGGAAAATCAGTTCATCTTACACTGGATGAGAGAACAGGTTCTGGATTTGTGTCGCATGATGTTTATCTTCATGGGTATTTCAGTGCTTCGATTAAGTTGCCTAGTGATTACACTGCTGGAGTTGTTGTTGCGTTTTATATGTCAAATGGTGATGTGTTCCAAAAGAACCATGACGAAATCGACTTTGAGTTTTTAGGAAACATTAGAGGCAAAGACTGGAGGATTCAGACCAATGTTTATGGTAATGGAAGCACCAACATCGGCAGAGAGGAAAGATATGGTTTCTCGTTCGATCCAGCTGAGGATTTTCACCAGTACAGTATTCTCTGGACAGATTCTCAGATCATATTTTATGTAGATGATGTTCCTATTAGAGAAGTTAAGAGAACAGAAGCTATGGGAGGAGATTTTCCCTCAAAGCCAATGACTTTGTATGCCACAATATGGGATGGATCTGATTGGGCTACTAATGGAGGAAAATATAGAGTGAACTACAAGTTTGCACCCTATGTTGCTGAATTCTCCGATCTCATCCTGCATGGTTGCGCCGTGGATCCCACGGAGCAAGTAGCCAAGTGTGACAATACTCAAAGCTCTAAAGCTGTTCCTTCTGGTGTTACGCCAGCACAAAGAATCAAAATGGAGAATTTCAGGCAGAAGCACATGACATACTCTTACTGCTATGATAAACTCAGATACAAAGTACCTCCTTCAGAGTGTGTGATCAATCCCAAAGAAGCTGAAAGGCTCAGGAAATTTGATCCTGTAACATTTGGCAATGGTAGGCGCCATGCCAAAAGACACCACCACCACCACAGCAGAGGAAGCCAGGCAGAGGCTGCATACTTTTAA 1125 0.4178 MRGYFQGLLLFGSLLFVLASGSSRNLPIIAFDEGYAPLFGDNNLVIHRDGKSVHLTLDERTGSGFVSHDVYLHGYFSASIKLPSDYTAGVVVAFYMSNGDVFQKNHDEIDFEFLGNIRGKDWRIQTNVYGNGSTNIGREERYGFSFDPAEDFHQYSILWTDSQIIFYVDDVPIREVKRTEAMGGDFPSKPMTLYATIWDGSDWATNGGKYRVNYKFAPYVAEFSDLILHGCAVDPTEQVAKCDNTQSSKAVPSGVTPAQRIKMENFRQKHMTYSYCYDKLRYKVPPSECVINPKEAERLRKFDPVTFGNGRRHAKRHHHHHSRGSQAEAAYF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01442 332 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 253 289 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Bach10g01442 332 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 293 IPR013320 -
Bach10g01442 332 MobiDBLite consensus disorder prediction 308 332 - -
Bach10g01442 332 CDD GH16_XET 29 289 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bach10g01442 332 Gene3D - 19 289 - -
Bach10g01442 332 PIRSF EndGlu_transf 4 294 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bach10g01442 332 Pfam Glycosyl hydrolases family 16 35 215 IPR000757 GO:0004553|GO:0005975
Bach10g01442 332 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 30 289 IPR044791 GO:0004553
Bach10g01442 332 FunFam Xyloglucan endotransglucosylase/hydrolase 18 291 - -
Bach10g01442 332 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 21 223 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01442 Bach-Chr10 14134934 14137366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01442 3 329 Glycoside Hydrolase AT1G14720 68.693 2.34e-172 480
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01442 10 14134934 14137366 Bach10g01442 10 14134934 14137366 ECH