Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01439 ATGATTGGAGGGAAGGATCTTGACTCTGAGGGGGAGAACTCTCGGAGCAAGCTCTCACAGCACCTTTCTGCACTCACCAAGGAAAACCCAGTAGCGAAAATGGGTTTTCCAGAGAAAGGTATTCACTTTCTGAAAGAATCAGAGATGGTTGTTGATGGTTTTCAATCAAAACCCACACAGGTTGGGAACTCAAGCCTGCAGGAACTGACTCTGAGCTACCTCTGTGATAACCCAAAATTGGGTCTTCCTGATAAAGAGATTCCTGGAAAAAGCTTGCTGAATTCCTTGGAAAAAGTCAGCTACAAAGGTAAAGAAGTCATCGTTTCTGAGAATTCAAATCAAGATGAGATATGGGTGGAAAGGGATTTTCTGAGTCTGAGTGAGACTAGAGAGAATTCTTCAAAGCGATCCATGGAAGAAGAGGGTGAAAGGGAAAATAGGGACAAAAAGGCTAAGCTTGAGACTCTTAATCTCTCTCTTGCTTTGCCTGATGTCTCACTTTCTCTTACAGCTTCAAACGCGCTTCAAAATGGTGATCAACCAGTGCGGCCAAAGCCTACTAAACCATCAACCAACACACATACCACATATTCAAATGATTATACAGCAGCATCTCTATCATACTCGTATTCTCACCCATTTTCCCACAACCCCAGTTGCTCCATTACCCGTAATTCAACTGATTTTGATTATTCAGTGAGCAAAGAAGATCAAATTTGGAATTGTGGGGAGGGGACCAATGGGTCAGTTCATAGTAGGTTCAAGCCAATTGGAGATGGGGTTGCTTTGTCGAATCATGGTGGTGGACTTAGTTCTTTTATGCAGAATAATAGTCAGTATAAAACTACAAGTTCAGATAGCCATTCTTTTTTCCCCTCGGAATTGCCTGCTAGGCCAAGGTTTGAGGCTCAGTCAGGGGACTCGAGAGGAAGGAATTCTGACAATCTGAGAGGGATGGATGGTTTAGATGGTGGTGGGAAAATTAGGAAAGTTTCTAGACCAGAAAGGATTCTCAGAGAAATTGTGTCTGAGTCTATCCCTACCATGGCGGTGATAATTCAGGAACTTACTGATGAAGTAATTGCATCAACTAAGGAGTACTTGAAAAATCTTATAGAATCTCATGAGAAGAAAGACGAACTGGTAAGCCTCCAAAACCGGCTCGAGCGAAGATCCGACCTCACCGAAGAGACTCTTTCCAAGTGTCACAAAGTGCAACTGGAGATTTTACTTGCTATCAAGATGGGGCTAGGAAGTTTCTTGTCGGAAAAAGTTGAATCATCCGAGATGGTAGAGATGTTCTTGTATACGAAGTGTAGAAATGTGAACTGCAAGAGTGTACTGCCTGTTGATGAATGTGACTGCAAGATTTGCTCTGGAAACAAAGGGTTTTGCAGCAATTGCATGTGTCCTGTCTGCTTGAACTTTGATTGTGCTAATAACACGTGCAGTTGGGTTGGTTGTGATGTTTGTTCCCATTGGTGCCATGCTGCATGTGGCATTCAGAGGAATCTTATCAAACCTGGGCCTAGCTTGAAGGGGGCTTCAGGGACCACAGAAGTGCAGTTTCATTGTATGGGTTGTGGACATTCTTCAGAAATGTTTGGGTTTGTTAAAGATGTATTTATTTGTTGTGCAAAAGATTGGGGTCTGGAAACCCTGATGAAAGAGCTTGACTGTGTACGAAGGATTTTCAAGAGAAGCGAAGATCGGAAAGGGAGGGAATTGCATGTTAAAGCTGATGACATGGTGTTGAAGCTTCAAACTAAAATGGTCTCTCCGTTGGATGCCTGCAATTTGATGATACAATTTTTCAACTATGCAGATAACATGTCAGATTTTCCTGCTTCTGGTATATCTTCAAAGGATTTTGCAGCGACGCAACCTAACCTTAGGAAGGACACAGCAGCACTTTCACAATCTAATTCTCTAATACCAAGTTATACTTATGACTCAAGCTATTCTAGGTCCCATCACGATGTGTTGTCAAATGATCTTCATCAGAAAGATATCAAATCCTCCATCTTAACTGAGCTGAAAAATGACAATGATTTCCAGCTGGGAGCTTTACTAAGGAAAGGTGGGCTTGAGAACTTGGAGAGTATTGTGAGGATAAAGGAGGCAGAAGCCAGAATGTTCCAAACCAAGGCCGAAGAAGCCCGGAGAGAAGCCGAAGGGTTCCAGAAGATGATTAGGACTAAGACTGCACAAATGGAAGAAGAGTATGCTGAAAAGCTTTCCAAACTGTGCTTGAATGAGACCGAGGAAAGGCGGGGGAAGAAATTGGAGGAATTGAAAGTTTTGGAAAGTTCTCATTGTGATTACTATAACATGAAAATGAGAATGCAAGCTGAGATTGCTGGTTTGTTGGAAAGAATGGAGGCAACAAAACAGCAATGGATTTAA 2406 0.4239 MIGGKDLDSEGENSRSKLSQHLSALTKENPVAKMGFPEKGIHFLKESEMVVDGFQSKPTQVGNSSLQELTLSYLCDNPKLGLPDKEIPGKSLLNSLEKVSYKGKEVIVSENSNQDEIWVERDFLSLSETRENSSKRSMEEEGERENRDKKAKLETLNLSLALPDVSLSLTASNALQNGDQPVRPKPTKPSTNTHTTYSNDYTAASLSYSYSHPFSHNPSCSITRNSTDFDYSVSKEDQIWNCGEGTNGSVHSRFKPIGDGVALSNHGGGLSSFMQNNSQYKTTSSDSHSFFPSELPARPRFEAQSGDSRGRNSDNLRGMDGLDGGGKIRKVSRPERILREIVSESIPTMAVIIQELTDEVIASTKEYLKNLIESHEKKDELVSLQNRLERRSDLTEETLSKCHKVQLEILLAIKMGLGSFLSEKVESSEMVEMFLYTKCRNVNCKSVLPVDECDCKICSGNKGFCSNCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGASGTTEVQFHCMGCGHSSEMFGFVKDVFICCAKDWGLETLMKELDCVRRIFKRSEDRKGRELHVKADDMVLKLQTKMVSPLDACNLMIQFFNYADNMSDFPASGISSKDFAATQPNLRKDTAALSQSNSLIPSYTYDSSYSRSHHDVLSNDLHQKDIKSSILTELKNDNDFQLGALLRKGGLENLESIVRIKEAEARMFQTKAEEARREAEGFQKMIRTKTAQMEEEYAEKLSKLCLNETEERRGKKLEELKVLESSHCDYYNMKMRMQAEIAGLLERMEATKQQWI 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01439 801 Coils Coil 703 737 - -
Bach10g01439 801 MobiDBLite consensus disorder prediction 1 15 - -
Bach10g01439 801 Pfam PHD - plant homeodomain finger protein 439 563 IPR032881 -
Bach10g01439 801 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 106 800 IPR004082 -
Bach10g01439 801 MobiDBLite consensus disorder prediction 274 325 - -
Bach10g01439 801 MobiDBLite consensus disorder prediction 274 291 - -
Bach10g01439 801 MobiDBLite consensus disorder prediction 174 198 - -
Bach10g01439 801 Pfam Coiled-coil region of Oberon 663 790 IPR032535 -
Bach10g01439 801 MobiDBLite consensus disorder prediction 129 151 - -
Bach10g01439 801 Coils Coil 751 771 - -
Bach10g01439 801 CDD PHD_OBE1_like 469 528 IPR047578 -
Bach10g01439 801 Coils Coil 779 799 - -
Bach10g01439 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 697 717 IPR004082 -
Bach10g01439 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 736 758 IPR004082 -
Bach10g01439 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 352 374 IPR004082 -
Bach10g01439 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 549 568 IPR004082 -
Bach10g01439 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 430 451 IPR004082 -
Bach10g01439 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 476 496 IPR004082 -
Bach10g01439 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 391 406 IPR004082 -
Bach10g01439 801 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01439 Bach-Chr10 14058058 14061819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01439 439 536 PHD Gene Family AT5G57380 27.551 6.92e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01439 10 14058058 14061819 Bach10g01439 10 14058058 14061819 ECH