Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01420 GCTTAAGCACTTGTTGTGTCTGAGAAACCAGCGCTTCTTGCTTCCTCACACCGTAACTTGGATGGAACTTCGTTTTCCATGTCGGTGTAGTGTTTGATTAAACTACTTGTAGCTTGGGGAGTATAAAATGGTGTCTAGGTCTTATTCAAATCTACTAGAGCTAGCCTCTGGTGAGTCCCCGTCATTTGGGTCCATGAGCCGGCGAATACCACGGATAATGACTGTGGCTGGTTTGATATCTGATGTTGATGATGAGCCAGTGGATAGTGCGGGCTCTGACCCTTCTTCGTCGGTCCACCGTGACAGGATTATAATAGTGGCCAATCAGCTTCCTATAAGGGCTCAGAGGAAACCAGATGGTAATAGGAACTGGTTTTTTAGTTGGGATGACAATTCACTTCTCCTCCAACTGAAAGATGGATTAGGAGATGATGATATTGATGTTATTTATGTTGGGTGTCTTAAGGAAGAAGTACATCCAAATGAACAAGATGAGGTCTCACAGATTCTTCTTGAGACTTTTAGATGTGTTCCAACTTTTCTCCCATCTGATCTGTTTAGCAGATACTATCATGGGTTTTGCAAGCAGCAATTGTGGCCACTGTTTCATTACATGTTACCCTTGTCACCAGAGCTTGGTGGTAGGTTTAATAGGTCATTGTGGCAAGCTTATGTCTCGGTGAATAAAATTTTTGCGGATAGAATTATGGAAGTGATTAACCCGGAAGATGATTACGTGTGGGTGCATGATTACCATCTCATGGTGTTACCAACTTTCTTGAGGAAGAGATTTAACAGAGTGAAGCTTGGTTTTTTCCTCCATAGCCCATTCCCTTCATCAGAAATATATAAGACATTGCCTATTAGAGAAGAGCTATTGAGAGCCCTCTTGAATGCAGATTTGATTGGGTTCCACACTTTCGATTATGCCCGGCATTTCCTCTCATGCTGTAGTCGAATGCTTGGTCTGTCTTACGAATCCAAAAGAGGTTATATTGGCCTTGAGTATTATGGTCGGACGGTTAGTATCAAAATTCTACCTGTTGGTATACACATGGGTCAGCTTCGGTCAGTTTTAAGCATGCCAAAGACCGAAGAAAAAGTTGCTGAGCTCATTAGACAGTTTAATGATCAAGGCAAGACAATGTTGCTTGGGGTGGATGACATGGATATTTTCAAGGGAATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTCATTCAGCACCCTGAGTGTCAGGGGAGGGTTGTATTGGTCCAGATAGCCAATCCTGCAAGGGGAAGAGGGAAAGATGTGAAAGAAGTGCAAGCTGAGACAAGGGCAATGGTGAAACGGATTAATGAAACATTTGGGAAACCTGGGTATGATCCTGTTATCCTTATTGAGGAGCCACTCAAGTTTTATGAGAAAGTTGCTTACTATGTTGTTGCTGAGTGCTGTTTAGTTACTGCTGTTAGGGATGGAATGAATCTCATACCTTATGAATATGTAATCAGTCGTCAAGGAAATGATAGATTGGATAAGGTTATGGGACTAGCTTCTTCTCCCAAGAAAAGCATGTTAGTTGTCTCTGAGTTCATCGGCTGTTCCCCATCTTTAAGTGGAGCAATCAGGGTCAATCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTGTGCTCTGATAATGGCTGATTCAGAGAAACAGCTTAGGCATGAGAAGCATTATAGATATGTTAGTACTCATGATGTTGGGTACTGGGCTCGTAGCTTCTTGCAAGATTTAGAAAGGACTTGTAGTAATCATGTACGACGAAGGTGGTGGGGAATTGGATTTGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAACACATAGTTTCAGCTTACAAGCGGACGACAACTAGAGCTATTCTTATAGATTATGATGGTACACTAATGCCTCAGGCTTCTATTGACAAGAGCCCAAGTTCTAAATCCATTGAAATTCTGAATAGTTTGTGTAGAGATGTGAACAACATGGTGTTTATTGTTAGTGCTAGAAGCCGTAAAACACTAGCGGAATGGTTTTCTTCTTGTGAGAAATTAGGAATTGCCGCTGAGCATGGTTATTTTCTAAGGCTAAAACGAGATGAAGAATGGGAAACATGCGGGCCCGCAACAGATGGCAGTTGGAAACAGATTGCAGAGCCTGTAATGAGGCTTTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACTGCCCTTGTCTGGTCTTATGAGGATGCTGATCCAGATTTTGGATCTTGCCAAGCTAAGGAACTTCTTGATCATCTTGAAAGTGTGCTTGCAAATGAACCGGTTACGGTCAAGAGTGGCCAGAATACAGTAGAGGTTAAACCACAGGGTGTGAACAAGGGTTTGGTGGCCAAGCGCCTACTTTCCACCATGAAAGACAAGGGAATCTCCCCTGATTTTGTTTTGTGCATCGGAGATGACCGGTCCGACGAAGACATGTTCGAGGTAATTGCCAGTTCCATGGCTGTTCCCTCCATAGCACCCAGGGCTGAAGTGTTTGCATGCACTGTTGGTAAAAAACCGAGTAAGGCCAAGTATTACCTTGACGACACAGCTGAAATTGTGAGATTGATGCAAGGCTTAGCTTCTGTTTCAGAACCAACACTCTTATTTTAGGCATGCAAAATGCGGCGAAAGGTATTTGTGCTTGCTTTTCTTTGTCATTATGCAGATGTAGGCTGATCAGTTTGTGCTCTTGAATTGTTTTCTTGGTATTTCATGTAAATTATCATAGCTGTCACTGAGAGAAGCTTTGTATCGGATTCTACTTCTCAAGTGTTTGATTTGTGCTGTCACGGGAAACTTGTAAATATATTTGGTTTTACACCATGAACTTTGCCATGCTCAAGGTTCTGATTCGGAATATAGTTTGTTC 2945 0.4234 MVSRSYSNLLELASGESPSFGSMSRRIPRIMTVAGLISDVDDEPVDSAGSDPSSSVHRDRIIIVANQLPIRAQRKPDGNRNWFFSWDDNSLLLQLKDGLGDDDIDVIYVGCLKEEVHPNEQDEVSQILLETFRCVPTFLPSDLFSRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLRSVLSMPKTEEKVAELIRQFNDQGKTMLLGVDDMDIFKGISLKLLAMEQLLIQHPECQGRVVLVQIANPARGRGKDVKEVQAETRAMVKRINETFGKPGYDPVILIEEPLKFYEKVAYYVVAECCLVTAVRDGMNLIPYEYVISRQGNDRLDKVMGLASSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDCALIMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSNHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILIDYDGTLMPQASIDKSPSSKSIEILNSLCRDVNNMVFIVSARSRKTLAEWFSSCEKLGIAAEHGYFLRLKRDEEWETCGPATDGSWKQIAEPVMRLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNTVEVKPQGVNKGLVAKRLLSTMKDKGISPDFVLCIGDDRSDEDMFEVIASSMAVPSIAPRAEVFACTVGKKPSKAKYYLDDTAEIVRLMQGLASVSEPTLLF 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01420 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 550 - -
Bach10g01420 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 594 711 - -
Bach10g01420 852 CDD HAD_TPP 596 837 - -
Bach10g01420 852 Gene3D Glycogen Phosphorylase B; 53 314 - -
Bach10g01420 852 Gene3D Glycogen Phosphorylase B; 315 532 - -
Bach10g01420 852 Pfam Glycosyltransferase family 20 60 548 IPR001830 GO:0003824|GO:0005992
Bach10g01420 852 NCBIfam HAD-IIB family hydrolase 597 800 IPR006379 -
Bach10g01420 852 FunFam Trehalose-6-phosphate synthase 2 678 757 - -
Bach10g01420 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 843 IPR001830 GO:0003824|GO:0005992
Bach10g01420 852 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 724 850 - -
Bach10g01420 852 Gene3D - 594 709 IPR023214 -
Bach10g01420 852 Gene3D - 724 849 IPR023214 -
Bach10g01420 852 FunFam Alpha,alpha-trehalose-phosphate synthase 316 532 - -
Bach10g01420 852 NCBIfam trehalose-phosphatase 594 842 IPR003337 GO:0003824|GO:0005992
Bach10g01420 852 SUPERFAMILY HAD-like 595 842 IPR036412 -
Bach10g01420 852 CDD GT20_TPS 60 548 IPR001830 GO:0003824|GO:0005992
Bach10g01420 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 314 - -
Bach10g01420 852 Pfam Trehalose-phosphatase 598 832 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01420 Bach-Chr10 13649431 13653001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01420 1 847 Trehalose Biosynthesis Gene Families AT1G68020 80.952 0.0 1458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01420 10 13649431 13653001 Bach10g01420 10 13649431 13653001 ECH