Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01416 ATGGCTACGTTGCAGAGTGTGGCACAGTCCAATATGAACAATACTGGAAGCAGCTATAGCTCCTGCAAGGGTGGCGCTGCTGCCACTCCTGCTACTGAAAACATGGTTTCTGATCAGTTTCCGGCGGGTCTCAGGGTTCTAGTGGTGGATGACGACCCCACCACCTTGAAAATCATTGAACAAATGTCTCGCCGATGTCGTTATAATGTTACCACATGTTTTCGAGCTACTATTGCTTTGGATCTTCTGCGGGAGAAGAAAGGATGTTTTGATGTGGTACTAAGTGATGTTCATATGCCGGACATGGATGGCTATAAACTCCTTGAACATGTTGGGCTGGAAATGGATCTTCCTGTTATTATGATGTCTGCTGATAGTAGAACAAGTGCTGTGATGAAGGGAATTAGACATGGAGCTTGTGATTATTTGATTAAGCCTGTACGTGAGGAAGAACTGAAGAATATATGGCAGCATGTGGTTAGGAAAAAATGGAATGAAAATAAAGAACATGAAAATTCTGGCAGTTTGGATGACAATGATAAGAATAAACGAGGAAATGATGAAGCTGAATATACTTCTTCTGTTATTGATGCAGCAGAAGGAATAGTTAAAGCGCCTAAAAGGAGGAGCACTTCAAAGGAAGATGATGATGGTGACCTGGAGAATGATGATCCATCCACATCAAAGAAGCCCCGTGTGGTCTGGTCAGTGGAACTGCATCAACAATTTGTCAGTGCTGTGAATCAACTTGGGCTTGACAAGGCTGTACCAAAGAGAATTCTTGAATTGATGAATGTACCTGGTTTGACTAGAGAAAATGTTGCAAGCCATTTGCAGAAATTTAGGCTTTATTTAAAGAGAATAAGTGGGGCTGCACAGCAACAAAACTCAATTTCTGGGTCTGTAGAGTCCAATGGCAAACTGGGTGGACTTGGAAGATTTGACATCCAAGCTTTGGCTGCCAGTGGCCAAGTTCCTCCACAAGCACTAGCTGCTCTCCATGCTGAGTTTTTAGGTAGTTCAGCTGGTAACTTAGTTCCAACGGTGGACCAGACGGCTCTCCTGCAAGCATCCATTCATGGGTCCAAGCATTCCCCTGCAGAACATGGGGTGGCATATGGTCAGCCTCTGGTAAAATGTACTTCCAACATTGCCAAAAGTTTTCCTCAGGGCGTCATAAATGTAAAAGATGCATCTCCAACATATGGAACATGGCCACTGTCTAGCACTGTTGGTTCATTGGGTCCCAATAGTGGTCTTGAAGGGATTGGTCCTCAGAGTAATAACATGATGGATATGTTGCAGCATCAGCACCAGCAAAGACAGCTGCAACAACAGAAGCAGCAGCAACAGTTGCAGCAGCAGTCAATAATACATGATCAAAGTTGTTCAATTAACGTGCAACCATCTTGCTTGGTGGTCCCCTCTCAATCTTCTGGCTCTCTCCAGGCAGGAAATAGTCAAGCTTCTGTCAATCAGAATTGCAGCTTTGGCAGAAATCCTTTTATTGATTATAGTCTCTTTTCACCTCAAGCGAATAATTCTTCATTAAATGTTGCTCAATTCCCTGATGGGGAAATGAAAGCTAGAGGTGTTCTCCCGGGGTATACTGCTCCTAGGTCCATTTCTCCTTCACCTTCGCCTAGTTCAATAAATACTGACAATAGCAATATCCAGCAGCTGCAAAATTCAACTTTGACATTAGGTGCTTTGAAGCAATTCCCAGGTCGTGCACCTAATATATCTGATACCCAAGGTCTCTATTGCAGTGGATCTGGTGATTTACTTGATCAAGGAGCTCTTAGGAATCTTGGATTTGTTGGAAGAGGTACCTGTATACCAAGCAGGTTTGCTGCACATGAAATTGAGTCATCAATAAATGAGTTTGGTCAAGGAAACATGTCTGTAAATAGCAATGATAACATAGTGAAGGAGGAGCCGAATATTGATTTTATGGATAATCCCAATGGGGGCTTCCCAGCCTTTCGAAGATATTGA 1998 0.4319 MATLQSVAQSNMNNTGSSYSSCKGGAAATPATENMVSDQFPAGLRVLVVDDDPTTLKIIEQMSRRCRYNVTTCFRATIALDLLREKKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADSRTSAVMKGIRHGACDYLIKPVREEELKNIWQHVVRKKWNENKEHENSGSLDDNDKNKRGNDEAEYTSSVIDAAEGIVKAPKRRSTSKEDDDGDLENDDPSTSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRISGAAQQQNSISGSVESNGKLGGLGRFDIQALAASGQVPPQALAALHAEFLGSSAGNLVPTVDQTALLQASIHGSKHSPAEHGVAYGQPLVKCTSNIAKSFPQGVINVKDASPTYGTWPLSSTVGSLGPNSGLEGIGPQSNNMMDMLQHQHQQRQLQQQKQQQQLQQQSIIHDQSCSINVQPSCLVVPSQSSGSLQAGNSQASVNQNCSFGRNPFIDYSLFSPQANNSSLNVAQFPDGEMKARGVLPGYTAPRSISPSPSPSSINTDNSNIQQLQNSTLTLGALKQFPGRAPNISDTQGLYCSGSGDLLDQGALRNLGFVGRGTCIPSRFAAHEIESSINEFGQGNMSVNSNDNIVKEEPNIDFMDNPNGGFPAFRRY 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01416 665 MobiDBLite consensus disorder prediction 202 216 - -
Bach10g01416 665 FunFam Two-component response regulator 44 181 - -
Bach10g01416 665 MobiDBLite consensus disorder prediction 532 553 - -
Bach10g01416 665 SUPERFAMILY Homeodomain-like 227 287 IPR009057 -
Bach10g01416 665 SUPERFAMILY CheY-like 43 168 IPR011006 -
Bach10g01416 665 MobiDBLite consensus disorder prediction 167 231 - -
Bach10g01416 665 PANTHER TWO-COMPONENT RESPONSE REGULATOR 44 442 IPR045279 GO:0009736
Bach10g01416 665 Coils Coil 433 453 - -
Bach10g01416 665 Gene3D - 226 289 - -
Bach10g01416 665 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 227 286 IPR017930 -
Bach10g01416 665 Pfam Myb-like DNA-binding domain 232 280 IPR001005 -
Bach10g01416 665 SMART REC_2 44 156 IPR001789 GO:0000160
Bach10g01416 665 CDD REC_typeB_ARR-like 46 160 - -
Bach10g01416 665 MobiDBLite consensus disorder prediction 167 190 - -
Bach10g01416 665 Pfam Response regulator receiver domain 46 154 IPR001789 GO:0000160
Bach10g01416 665 MobiDBLite consensus disorder prediction 1 23 - -
Bach10g01416 665 NCBIfam myb-like DNA-binding domain, SHAQKYF class 230 283 IPR006447 GO:0003677
Bach10g01416 665 ProSiteProfiles Response regulatory domain profile. 45 160 IPR001789 GO:0000160
Bach10g01416 665 FunFam Two-component response regulator 226 289 - -
Bach10g01416 665 Gene3D - 44 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01416 Bach-Chr10 13599822 13604935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01416 78 342 Response Regulator Gene Family AT3G16857 55.282 2.74e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bach10g01416 Response_reg 3.1e-22 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01416 10 13599822 13604935 Bach10g01416 10 13599822 13604935 ECH