Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01399 ATGCACAACATGCTTTCTCGGAGTTTCACTGGATGCTTCAATAGCATCCTCAAGAACCACCTTAACATCCTCAAAATCCCCTCGCACGTCTCTCTATTTCACAGCCTTTCCAAGTCTCTTGCTCTTGTTTCAAAGCTAGATTTCATCTTAAACGAGGTTGAAGAGCTTCAATCTTCAAAATCCACTAATAGGTTTTCTCCGCCAACCTCAGAACCTGATGAATTTTCCGATATGGATGTTCCCAAGAAGGCGGAACACTCTCCGGTTCAGATTTCACATCCTTGGCCTGAATGGGTGGATTTAATGGAGTGCTTGCTGAAAAGGGGGTACTTTGATGCAGAGGGAAACCCATTTCGCAAAGATCAATTGGGTGATAAGGAGTCCAAGATTATCAGGACTGCGTGTCTGAATTTCGGTCGTGATCAGTATAGTCTTTTAAGGTTCTTGTCTCGGCAAGATATACAAGTTGCTGTAGGATGTGGATGCCCGAGCTTAGATAGGAAAGTTGTCAACTCAGGGAAGCGTTTGAGAGCACATGTGGGTATCGATGAGGGAAATGTCTGCAGCTCCTGCAATTTGAGGGGAGACTGTGACAGGGCATTTGTGAAAGCACGTGAAGACGAAGGAGGAAGGACAGTCGATGTTATGCGTATTATCTTGACATATGGGCTTGATCCCATCATTGGCTCTGTGGAAAACAAGCCATGTCTTAATAAAATGGTTAAAGAATCAATGAGAAGACTACTGAAAAAATTAGTAAAGGCCAGTACTGAAGAGGACAATTATAATCTCCCAGACACCCGAAAGGTTGAAATTAGACAAGTCAATACCGATCCAGAAGATGAGTGCAAAATAAAAGTTCCAATGAAGCAAGGTGACTGGGTTTGCCCCAAATGCAACTTCCTCAACTTTGCACGAAACATCAAGTGCTTGCGCTGTAATGAGTTATTCCAGGAAAGGATAAGTCAATTGCAGAAGGATCAAGACCATCTGCCTTTGAAGAAAGGAGACTGGATATGTAACAAATGCAACTTCCTAAATTTTGCAAAAAATACTAGATGCTTTCAGTGCAAAGAGAATCCACCGAAGCGGCATCTTAATCCAGGGGAGTGGGAGTGTCCCTCGTGCAACTACATTAATTTCAGGAGAAATATGGTCTGCCTGAAATGTGATCACCGGCGACCAAAGGCATCTAATGCTTCAGATTCTTTTCAATCTCAGCATGAAGATAAAGACCATAGTAAGAGTAGCAAATTGAATCTCTTGAGAAGCAATGGTAATATTGACCAATCATCTTGGGTGATGCATAGAAACCGGAACAGAGGTTCAGATACATGGAGATTTGTCGACGATGTGATTGGAGACAAAAATTGCTCAAACTCATGGAATGATAATTCCCTATTTATAAATTTTCCCATTGTTGGAGGTAAGACTGAATTGTCTAAGAATGTGCAAAAAAGAGAAGAATGGAAAAAAGATATGTTAACAACGAGCAAAGGTGTTGTGGGGACTGACGGAAGTGATGATGAATTCTGGTCTGATGACAATCAGAACAGTAAAAGAATTTTTGATCTTACCGATGATGAAGAGATAGACGAATGGTTTGGAAATGGCAAGAATGGAAGAAATAGGATACCTGCAAACGAGTGA 1650 0.4152 MHNMLSRSFTGCFNSILKNHLNILKIPSHVSLFHSLSKSLALVSKLDFILNEVEELQSSKSTNRFSPPTSEPDEFSDMDVPKKAEHSPVQISHPWPEWVDLMECLLKRGYFDAEGNPFRKDQLGDKESKIIRTACLNFGRDQYSLLRFLSRQDIQVAVGCGCPSLDRKVVNSGKRLRAHVGIDEGNVCSSCNLRGDCDRAFVKAREDEGGRTVDVMRIILTYGLDPIIGSVENKPCLNKMVKESMRRLLKKLVKASTEEDNYNLPDTRKVEIRQVNTDPEDECKIKVPMKQGDWVCPKCNFLNFARNIKCLRCNELFQERISQLQKDQDHLPLKKGDWICNKCNFLNFAKNTRCFQCKENPPKRHLNPGEWECPSCNYINFRRNMVCLKCDHRRPKASNASDSFQSQHEDKDHSKSSKLNLLRSNGNIDQSSWVMHRNRNRGSDTWRFVDDVIGDKNCSNSWNDNSLFINFPIVGGKTELSKNVQKREEWKKDMLTTSKGVVGTDGSDDEFWSDDNQNSKRIFDLTDDEEIDEWFGNGKNGRNRIPANE 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01399 549 PANTHER ZINC FINGER PROTEIN 37 320 - -
Bach10g01399 549 MobiDBLite consensus disorder prediction 398 421 - -
Bach10g01399 549 ProSitePatterns Zinc finger RanBP2-type signature. 338 357 IPR001876 -
Bach10g01399 549 ProSitePatterns Zinc finger RanBP2-type signature. 294 313 IPR001876 -
Bach10g01399 549 ProSiteProfiles Zinc finger RanBP2 type profile. 367 396 IPR001876 -
Bach10g01399 549 SUPERFAMILY Ran binding protein zinc finger-like 362 397 IPR036443 -
Bach10g01399 549 SUPERFAMILY Ran binding protein zinc finger-like 286 315 IPR036443 -
Bach10g01399 549 Gene3D - 283 316 - -
Bach10g01399 549 Gene3D - 325 364 - -
Bach10g01399 549 Gene3D - 365 397 - -
Bach10g01399 549 ProSitePatterns Zinc finger RanBP2-type signature. 371 390 IPR001876 -
Bach10g01399 549 Pfam Zn-finger in Ran binding protein and others 334 358 IPR001876 -
Bach10g01399 549 Pfam Zn-finger in Ran binding protein and others 290 313 IPR001876 -
Bach10g01399 549 Pfam Zn-finger in Ran binding protein and others 369 391 IPR001876 -
Bach10g01399 549 MobiDBLite consensus disorder prediction 60 87 - -
Bach10g01399 549 SUPERFAMILY Ran binding protein zinc finger-like 328 361 IPR036443 -
Bach10g01399 549 SMART zf_4 292 316 IPR001876 -
Bach10g01399 549 SMART zf_4 369 393 IPR001876 -
Bach10g01399 549 SMART zf_4 336 360 IPR001876 -
Bach10g01399 549 ProSiteProfiles Zinc finger RanBP2 type profile. 290 314 IPR001876 -
Bach10g01399 549 ProSiteProfiles Zinc finger RanBP2 type profile. 334 363 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01399 Bach-Chr10 13398082 13401147 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01399 366 396 EF-hand Containing Proteins AT1G55040 48.387 4.72e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01399 10 13398082 13401147 Bach10g01399 10 13398082 13401147 ECH