Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01374 CTTTATCTTTCTGGTAAATGAACGTGGAGAAGGGTTGCTTCCCTCTTTGTTGGTGAAGAAAGGACTTTGGCTCTAAATTGGAGGAGGGCTTTCTTTGGAATCTGGTTTTGGTGAGATTTTGAGCTGTGAAATGGAGAGAGATTTCCTGGGTTTGAGCTCAAAGGAGCCATTAACTGTGGTGAAGGAGGAGATTACCAATGATTTTGGCAAAGACCCAGGATTCACTAAGGGCTCAGTTGTGCAATGGCCTTTCTCCAACAAAGTCTCTGCTGTTCCACATTTGGTGTCTTTCAAGGTTTCTCAAGATGACAAGACAAAAAAGATGTTGCCTGACCCCCTAACATCTGTTGGATTTATGGCTATCTCAAGTCCGGATGCATATGATGCTAGTCAGAAACGGCCTGCAAGTGAACTCCAGAAATCTTTCAATCATGATGGGCAAGGTCGATTTCATTTTTCCCTGACTCCATATCCTGTACAGCATGATGTGCTTTCTGTGAATCGTCCTCATGATGTGAAGATGTTTTCAGTTTCGAATCAAGCAATTTCAGTGTCCATGGGGCATCCGCTCTTGAATAACCATTTTGCAACTGTTGGTCAGAATATGACTGGTAATAACGTCAAGCCACAGCTACTTGGTGGATTACCTGTTGCTACTCCTCATTCAGTTCTTCCCAACATTGGTTCAGTTTCAAAAATGACTGAATCATGTGTGAAGCCATCTGCGCCTGCTCAACTTACCATCTTCTATGCCGGTACTGTCAATGTCTTTGATGATATCTCCCCAGAGAAGGCACAAGCTATCATGCTTTTGGCTGGGAATGGGGTTTCTGCAGTTGCTAACGCAGCACAGCCAAAAGTTCAGGTACTCTTCCCAAAGGTGACATCAGTTGATGGTGTGCCTGTGAATCAACCCATTAATATACCACCTTGCTCTGGTCTTGTGAGCCCTCTATCCGTTTCTTCACATACTGGTACCCAGTCTGGGACTGGCTCAACGAGCACGGAGGAGTTTCTGGCTGCTAAAACAACTGGAGTTCCCACCACGGCAGTTAGCAAATCTGATTCTCCAAAATTACTCAGTTCACCCGCCATGTTGCCATCAGCGGTCCCCCAGGCTCGCAAAGCTTCCTTGGCTAGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAATGCTGCACCATATAACCTGAACAAGATGTCTGACGAGTATGCCACTGCAGAATACAATGGTGCTAATTATTCAGCAAGTACTCCTATTAGTGCCAATGCTCTATGA 1279 0.4519 MERDFLGLSSKEPLTVVKEEITNDFGKDPGFTKGSVVQWPFSNKVSAVPHLVSFKVSQDDKTKKMLPDPLTSVGFMAISSPDAYDASQKRPASELQKSFNHDGQGRFHFSLTPYPVQHDVLSVNRPHDVKMFSVSNQAISVSMGHPLLNNHFATVGQNMTGNNVKPQLLGGLPVATPHSVLPNIGSVSKMTESCVKPSAPAQLTIFYAGTVNVFDDISPEKAQAIMLLAGNGVSAVANAAQPKVQVLFPKVTSVDGVPVNQPINIPPCSGLVSPLSVSSHTGTQSGTGSTSTEEFLAAKTTGVPTTAVSKSDSPKLLSSPAMLPSAVPQARKASLARFLEKRKERVMNAAPYNLNKMSDEYATAEYNGANYSASTPISANAL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01374 382 ProSiteProfiles Tify domain profile. 196 231 IPR010399 -
Bach10g01374 382 Pfam Jas motif 328 352 IPR018467 -
Bach10g01374 382 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 135 360 IPR040390 -
Bach10g01374 382 SMART tify_2 196 231 IPR010399 -
Bach10g01374 382 Pfam tify domain 197 230 IPR010399 -
Bach10g01374 382 MobiDBLite consensus disorder prediction 276 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01374 Bach-Chr10 12184960 12188209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01374 37 358 Tify Gene Family AT3G17860 39.296 1.77e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bach10g01374 tify 1.3e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01374 10 12184960 12188209 Bach10g01374 10 12184960 12188209 ECH