Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02429 ATGGCAGCTACTAGTAGGAACATTGAGAAGATGGCTTCAATTGATGCTCAGCTGAGGTTGCTGGCACCAAGGAAGGTTTCTGATGATGACAAGCTTGTTGAGTATGATGCTTTGTTGCTTGATCGATTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGGCAAACGGTTCAAGATTGTTATGAGCTTTCAGCTGAGTATGAAGGGAAGCATAAGACTGAGAAGTTGGAGGAACTTGGGAATATGCTAACTGGTCTTGATGCTGGGGATTCTATTGTCATTGCCAAATCATTTTCCCACATGCTTAATTTGGCTAACTTGGCAGAAGAAGTCCAAATTGCCTACCGAAGAAGGATTAAGCTATTAAAGAAGGGCGATTTTGCTGATGAGAACTCTGCCATCACTGAATCTGACATTGAAGAAACCTTCAAGAGGCTTGTGACTGAACTGAAGAAGTCCCCACAGGAAGTGTTTGATGCTTTGAAGAACCAAACTGTAGATTTGGTCCTAACTGCTCATCCCACTCAGTCCATTCGTCGATCTCTGCTGCAAAAGCATGGAAGGATAAGGAACTGTCTGACACAGTTGTATGCGAAAGACATAACACCGGATGATAAGCAGGAACTTGATGAGGCTCTCCAAAGAGAGATTCAAGCTGCATTTCGCACAGATGAAATTCGAAGGAGTCCTCCAACACCACAAGATGAGATGAGGGCAGGAATGAGCTACTTTCATGAGACAATATGGAAAGGTGTACCAAAGTTTTTGCGCCGTGTTGACACAGCTCTGAAGAACATCGGAATAAATGAGCGTGTCCCATACAATGCCCCTCTTATTCAATTCTCTTCTTGGATGGGAGGAGATCGTGATGGTAACCCTAGGGTAACCCCTGAAGTTACAAGGGATGTGTGTTTGCTGGCTAGAATGATGGCTGCTAATTTATACTTCTCTCAGATAGAAGATCTCATGTTTGAGTTGTCTATGTGGCGCTGCAATGATGAGCTTCGTGTTCGTGCTGATGAACTCCATGTGTCCTCAAGGAGAGATGCAAAACATTACATTGAATTTTGGAAGCAGATTCCTCCAAATGAGCCATATCGTGTTATTCTTGGTGATGTGAGGGACAAACTATACAATACACGCGAACGTGCTCGCCAGTTATTAGCCAATGGAACCTCTGACATCCCCGAAGAGACAACCTTCACAAATGTTGAGCAGTTCCTGGAGCCCCTTGAACTCTGCTATAGATCACTCTGCGCATGTGGTGATCGACCAATAGCAGATGGTAGCCTTCTTGATTTCTTGCGGCAAGTTTCCACATTTGGACTCTCAATGGTAAGACTCGACATTCGTCAAGAGTCAGACCGGCACACTGATGTCATGGATGCCATTACCAAACACTTGGAGATTGGATCATACCGAGAGTGGTCTGAGGAACGCAGGCAGGAATGGCTTCTGTCAGAGCTCAGTGGAAAGCGCCCTCTGTTCGGCCCTGATCTTCCCAAAACAGAAGAGATCGCCGATGTTCTGGAAACCTTCCATGTCATTGCAGAACTTCCCTCAGACAACTTTGGTGCCTACATAATCTCAATGGCAACAGCACCGTCTGATGTGCTTGCTGTTGAGCTCTTACAACGGGAATGCCATGTGAAGCAACCGCTAAGGGTCGTGCCATTGTTTGAAAAGCTTGCTGATCTTGAGTCTGCTCCTGCTGCAGTGGCGCGGCTTTTCTCTATTGATTGGTACAGAAACCGAATCAATGGGAAGCAAGAAGTTATGATAGGATACTCAGACTCAGGAAAAGATGCCGGTCGTCTTTCTGCGGCTTGGGCGCTGTACAAGGCTCAAGAGGAGCTCATAAAGGTTGCAAAGGATTTCGGTGTTAAGCTGACAATGTTCCATGGCAGAGGAGGGACTGTTGGAAGAGGAGGCGGCCCCACTCACCTTGCTATATTATCTCAGCCACCAGAAACCATTCATGGCTCACTTCGGGTGACAGTTCAAGGTGAAGTTATTGAACAATCCTTTGGAGAGGAGCACTTGTGCTTTAGAACTCTCCAGCGATTCACTGCTGCTACACTTGAGCACGGAATGCACCCTCCCGTGTCACCCAAACCGGAATGGCGAGTGCTGCTAGATGAGATGGCTGTCATTGCAACGAAGGAGTATCGCTCCATTGTTTTCCAGGAACCCCGTTTTGTTGAATACTTCCGATGTGCTACCCCTGAGTTGGAGTATGGACGAATGAACATTGGAAGTCGTCCATCAAAGAGAAAGCCGAGTGGAGGAATCGAATCACTGCGTGCTATTCCATGGATTTTTGCTTGGACACAAACAAGGTTTCATTTGCCAGTGTGGCTTGGCTTTGGTTCTGCATTTAAGCATGCAATTGAGAAGGATCCAAAGAATCTCCTAATGCTTCAAGATATGTACAACCAGTGGCCTTTCTTCAGGGTCACCCTGGACTTGATCGAGATGGTGTTCGCCAAGGGAGACCCGGGGATCGCTTCCCTGTACGACAAACTCCTAGTGTCAGAAGAGCTGTTGCCATTCGGAGAGCGCTTGAGGACTAAATATGAAGAAACCAAGAGTTTTCTCCTTCAGGTTGCTGGGCACAGGGATCTTCTTGAAGGTGACCCCTACTTGAAGCAAAGGCTTCGTCTCCGCGATTCATACATCACAACCCTGAATGTGTTACAAGCCTACACGTTGAAGAGAATCCGCGACCCCGACTACCATGTCAAGTTGAGGCCACATTTGTCAAAGGAATTCATGGAATCAAGCAAGCCAGCTGCAGAACTTGTTAAACTCAACCCAAAAAGTGAGTATGCTCCTGGTTTGGAGGACACACTTATCTTGACAATGAAGGGTATTGCTGCTGGCATGCAAAACACAGGTTAA 2907 0.4651 MAATSRNIEKMASIDAQLRLLAPRKVSDDDKLVEYDALLLDRFLDILQDLHGEDIRQTVQDCYELSAEYEGKHKTEKLEELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETFKRLVTELKKSPQEVFDALKNQTVDLVLTAHPTQSIRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRVRADELHVSSRRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGTSDIPEETTFTNVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSMVRLDIRQESDRHTDVMDAITKHLEIGSYREWSEERRQEWLLSELSGKRPLFGPDLPKTEEIADVLETFHVIAELPSDNFGAYIISMATAPSDVLAVELLQRECHVKQPLRVVPLFEKLADLESAPAAVARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELIKVAKDFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRVLLDEMAVIATKEYRSIVFQEPRFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGSAFKHAIEKDPKNLLMLQDMYNQWPFFRVTLDLIEMVFAKGDPGIASLYDKLLVSEELLPFGERLRTKYEETKSFLLQVAGHRDLLEGDPYLKQRLRLRDSYITTLNVLQAYTLKRIRDPDYHVKLRPHLSKEFMESSKPAAELVKLNPKSEYAPGLEDTLILTMKGIAAGMQNTG 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02429 968 Gene3D Phosphoenolpyruvate/pyruvate domain 311 446 - -
Arst8g02429 968 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 171 182 IPR018129 -
Arst8g02429 968 PRINTS Phosphoenolpyruvate carboxylase signature 283 298 IPR021135 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 PRINTS Phosphoenolpyruvate carboxylase signature 443 463 IPR021135 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 PRINTS Phosphoenolpyruvate carboxylase signature 634 663 IPR021135 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 PRINTS Phosphoenolpyruvate carboxylase signature 170 183 IPR021135 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 PRINTS Phosphoenolpyruvate carboxylase signature 592 612 IPR021135 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 PRINTS Phosphoenolpyruvate carboxylase signature 223 239 IPR021135 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 PRINTS Phosphoenolpyruvate carboxylase signature 766 792 IPR021135 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 594 606 IPR033129 -
Arst8g02429 968 Hamap Phosphoenolpyruvate carboxylase [ppc]. 25 968 IPR022805 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 35 968 IPR015813 GO:0003824
Arst8g02429 968 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 35 968 IPR015813 GO:0003824
Arst8g02429 968 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 5 968 IPR021135 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 5 968 IPR021135 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 FunFam Phosphoenolpyruvate carboxylase 1 311 446 - -
Arst8g02429 968 Pfam Phosphoenolpyruvate carboxylase 38 968 IPR021135 GO:0006099|GO:0008964|GO:0015977
Arst8g02429 968 Pfam Phosphoenolpyruvate carboxylase 38 968 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02429 Arst-Chr8 33566125 33571617 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02429 8 33566125 33571617 Arst8g02429 8 33566125 33571617 ECH
Arst8g02429 8 33566125 33571617 Arst3g02002 3 24188666 24194989 PCT
Arst3g02286 3 29327021 29334328 Arst8g02429 8 33566125 33571617 PCT