Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02408 ATGAACAAGCCTGATTCCACCAACCTCGATCTACGACCTTCCCCTCTCAAACTCACCACCACCTCCGCCGCCCGAACCAAGAATCCACCCCGTGCCCCTACTAACCCAGCCAACTTCTCCGGCGACCTCGCCGGAGCACACGACGCCGTCCGATCCGTCCCGGCGCCCCCGAGGAGCTCCAAACCAGGTCACCGGAGAACTGTTTCCGCCGGAGCTCCGCTAATCTACTCCGGAGGAAGCTCAAACACCAGCCCGAACCTTTCTCCCGGCGGGAACATCTTCCCTGCCGGAAAATCTCCCAAACCAGTTGCTCTACCCACTCGCGGGCCGAGCCGGCCAGATGTTCTCGGCTCCGGCGCCGTGAACTATGGCCGCGGCAGCATCGTGCGAGGTGGTGGGGGCGCCAAGCATGGGAACAGCACCAACGGTTTTTGTGATGCTGAAGAATTGAAGAGGTTAGGGAATGAGTTTTATAGGAATGGGAACTTCGTGGATGCTCTGGCAATGTATGATCGTGCTGTTGCGGTGTCACCGGGCAATGCGGCGTGCCGGAGTAACCGTGCCGCGGCGCTTACAGCGTTGGGGAGGCTGGGAGAGGCCGCAAAGGAGTGTGACGAGGCTGTGAGTTTGGACCCTGGTTATGCCAGGGCGCATAAGAGGCTTGCTTCTCTATATTTGCGCTTTGGGCAGGTAGAAAACTCACAGCTTCACCTCTCTCTATCTGGGCTAAAAATGGATGAATATGAAGAGCAAACACTGATGTTCTTAGAGAAGCATCTAAACCGATGTGAAGATGCACGAAAGGTTGGTGATTGGAAGGGCGTACTTAGGGAATCAGAGGCGGCCATTGCGGTTGGAGCAGACTTCTCACCTCAGCTTGTTGCTTGTAAAGCAGAAGCTTATTTGAAGCTTCATCTGTTTGAGGATGCGGAATCCACACTTTCAAACATTCCCAAGGTGGAAGGTTGTCCCCTGGCCTACTCTCAAATCAAGTTTTTTGGCATGCTTGGTGAAGCCTACGTGCCTTTTGTCTCTGCACAGGTTCAGATGGCCTTGGGAAGGTTTGAGACTGCTGTTGCTGCAGCAGAAAAGGCTAGCCTGTTAGATCACCATAATGTTGAAGTTGCCAGGATTGTTAATACTGTAAAAATGGTAGCAAGAGCTCGATCAAGGGGCAATGATCTTTTCAGCTCTGGCAAGTTCTCTCAAGCGTGTTCTGCTTATGGCGAAGGCCTCAAATATGACTGTTTCAACTATGTTCTATATTGCAATAGAGCTATTTGTTGGTCTAAACTTGGACTATGGGAACAATCTGTTCAAGATTGCAACCAAGCTCTTCTCATTCAACCAAATTACACCAAGGCACTTTTCCGCAGAGCCGCATCAAATGCAAAGCTTGAAAGATGGGCGGAAGTTGTTAAAGATTATGAGACTTTAAGGTGTGAACTCCCCGAAGACAGTGAAGTTGCTGAATTTCTTCGCCAGGCTAAACTAGCATTGGAAAAATCTCGTGAAGCGGTATATGCAGTTGAAGTCGAAGAAATCTTGGCACTAGATAAATTCAAGGCAGCTATTGCTTCTGCTGGTGTTTCGGTAGTTCATTTCAAAGTGGCATCAAATGAACTATGTGAAGAAATATCTCCATTCGTAAATACATTGTGCGTTAGATATCCATCTGTCAAGTTTATTAGGGTGGATGTTGAAGAGTGTCTATCAATAGCAAAAGCTGAAAACATTAGAATTGTTCCAACTTTCAAAATATATAAAAATGGGGTGAAGGTGAAGGAAATGATCCGGCCAATCCACCAGTTGTTAGAGGACTCAGTAAGGAAAAATAGTAGTCTCTAA 1848 0.4876 MNKPDSTNLDLRPSPLKLTTTSAARTKNPPRAPTNPANFSGDLAGAHDAVRSVPAPPRSSKPGHRRTVSAGAPLIYSGGSSNTSPNLSPGGNIFPAGKSPKPVALPTRGPSRPDVLGSGAVNYGRGSIVRGGGGAKHGNSTNGFCDAEELKRLGNEFYRNGNFVDALAMYDRAVAVSPGNAACRSNRAAALTALGRLGEAAKECDEAVSLDPGYARAHKRLASLYLRFGQVENSQLHLSLSGLKMDEYEEQTLMFLEKHLNRCEDARKVGDWKGVLRESEAAIAVGADFSPQLVACKAEAYLKLHLFEDAESTLSNIPKVEGCPLAYSQIKFFGMLGEAYVPFVSAQVQMALGRFETAVAAAEKASLLDHHNVEVARIVNTVKMVARARSRGNDLFSSGKFSQACSAYGEGLKYDCFNYVLYCNRAICWSKLGLWEQSVQDCNQALLIQPNYTKALFRRAASNAKLERWAEVVKDYETLRCELPEDSEVAEFLRQAKLALEKSREAVYAVEVEEILALDKFKAAIASAGVSVVHFKVASNELCEEISPFVNTLCVRYPSVKFIRVDVEECLSIAKAENIRIVPTFKIYKNGVKVKEMIRPIHQLLEDSVRKNSSL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02408 615 Pfam Thioredoxin 516 599 IPR013766 -
Arst8g02408 615 CDD TRX_family 521 606 - -
Arst8g02408 615 SMART tpr_5 181 214 IPR019734 GO:0005515
Arst8g02408 615 SMART tpr_5 339 372 IPR019734 GO:0005515
Arst8g02408 615 SMART tpr_5 147 180 IPR019734 GO:0005515
Arst8g02408 615 SMART tpr_5 419 452 IPR019734 GO:0005515
Arst8g02408 615 SMART tpr_5 453 486 IPR019734 GO:0005515
Arst8g02408 615 MobiDBLite consensus disorder prediction 74 90 - -
Arst8g02408 615 SUPERFAMILY TPR-like 146 374 IPR011990 GO:0005515
Arst8g02408 615 SUPERFAMILY Thioredoxin-like 427 609 IPR036249 -
Arst8g02408 615 FunFam TPR repeat-containing thioredoxin TTL4 506 613 - -
Arst8g02408 615 Pfam Tetratricopeptide repeat 153 214 - -
Arst8g02408 615 ProSiteProfiles TPR repeat profile. 147 180 IPR019734 GO:0005515
Arst8g02408 615 Gene3D Glutaredoxin 503 613 - -
Arst8g02408 615 MobiDBLite consensus disorder prediction 1 119 - -
Arst8g02408 615 Gene3D Tetratricopeptide repeat domain 145 502 IPR011990 GO:0005515
Arst8g02408 615 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 57 610 IPR044534 -
Arst8g02408 615 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02408 Arst-Chr8 33410796 33414273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02408 157 232 Glycosyltransferase AT3G04240 32.895 2.54e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02408 8 33410796 33414273 Arst8g02408 8 33410796 33414273 ECH
Arst7g03059 7 76794342 76795442 Arst8g02408 8 33410796 33414273 PCT