Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03059 ATGTCGCATCCGGGGAAGCCCGTTACCGAGTTGGATTCGGTCACTGACCGATTCCGTGACTCACTGAGTTGCGAGGCCGCCAGTCGAGACGCTAACAAACCAGATTTCCGCGAACTCGATCTGGGCTCGCCAGTATCGCCGCTTCGTACGGCTCACCACGCGGTCGGCGCCGCTGGAAACGGAGGACCTGCCGCCAGTAGCAGCTCAAGCTCATCCGGATCCTTCTCGGGTCGAACCAACCCGGTTTCCAGAAGATCCGATTCGGGACACACCAACAGCAACGGCAACAACAACCACTCTGGCGAGCTTTCTGGTTCAAGTGAGAACAGCCCAACCGCAACCGGCGGCGGGAACACTCGGATCCTGAAACCGGGTCAAGCGAGATCTGATTCAATCTATTCAGGTCAGAACGGAGGCTCCTCCTCCTCTTCCTCCTCAGCCGTGAATTCGCCGCCGCTGAACGTCCTCCCCACCGGAAACATCTGTCCCTCCGGTAGGATCGTGAAGACAGGCATGGCGGCGAATCGGAGCTCGAGGAGCGACGTTTTGGGCTCCGGCATGGGGAATTACGGCCACGGAAGCATAATTCGCGGCGGCGGAAAGAGCGGCAGCAGCACGCCTGATTCGCCAGGGATCCCAAGCGTGCGGTCGAGCAGCGGCATTGGCGGCGAAGGCAATGTGGCGAAGAGGGGAGCGACGCAGGGTTCGGATCCGGAGGAGCTGAAGAGAGCTGGGAATGAGCATTACAAGAGGGGCCACTTCGCCGAGGCATTAGGGTTATATGATCGGGCAATTGCGCTTTCTCCGGCAAGTGCCGCCTACCGGAGCAACCGCGCGGCGGCCCTTACAGGTCTTGGGAGGCTAGGTGAGGCTGTGAGGGAGTGTGAAGAGGCTGTGAGGTTGAATCCTAATTATGGCAGGGCTCATCATCGTTTGGCATCTCTTTTCTTAAGGTTGGGGCAAGTTGAGAATGCAAGGAAGCACCTTTGTTACCCTGGGATGCCTCATGTTTTCTTTTCTTTTGTTTAG 1029 0.5831 MSHPGKPVTELDSVTDRFRDSLSCEAASRDANKPDFRELDLGSPVSPLRTAHHAVGAAGNGGPAASSSSSSSGSFSGRTNPVSRRSDSGHTNSNGNNNHSGELSGSSENSPTATGGGNTRILKPGQARSDSIYSGQNGGSSSSSSSAVNSPPLNVLPTGNICPSGRIVKTGMAANRSSRSDVLGSGMGNYGHGSIIRGGGKSGSSTPDSPGIPSVRSSSGIGGEGNVAKRGATQGSDPEELKRAGNEHYKRGHFAEALGLYDRAIALSPASAAYRSNRAAALTGLGRLGEAVRECEEAVRLNPNYGRAHHRLASLFLRLGQVENARKHLCYPGMPHVFFSFV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03059 342 MobiDBLite consensus disorder prediction 172 240 - -
Arst7g03059 342 MobiDBLite consensus disorder prediction 199 221 - -
Arst7g03059 342 Gene3D Tetratricopeptide repeat domain 232 330 IPR011990 GO:0005515
Arst7g03059 342 MobiDBLite consensus disorder prediction 129 157 - -
Arst7g03059 342 SUPERFAMILY TPR-like 239 327 IPR011990 GO:0005515
Arst7g03059 342 ProSiteProfiles TPR repeat profile. 238 271 IPR019734 GO:0005515
Arst7g03059 342 MobiDBLite consensus disorder prediction 25 160 - -
Arst7g03059 342 SMART tpr_5 238 271 IPR019734 GO:0005515
Arst7g03059 342 SMART tpr_5 272 305 IPR019734 GO:0005515
Arst7g03059 342 Pfam Tetratricopeptide repeat 239 270 IPR013105 -
Arst7g03059 342 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 26 333 IPR044534 -
Arst7g03059 342 Pfam Tetratricopeptide repeat 277 305 IPR019734 GO:0005515
Arst7g03059 342 MobiDBLite consensus disorder prediction 62 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03059 Arst-Chr7 76794342 76795442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03059 239 329 U-box Gene Family AT3G07370 34.066 1.01e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03059 7 76794342 76795442 Arst7g03059 7 76794342 76795442 ECH
Arst7g02357 7 56158811 56163693 Arst7g03059 7 76794342 76795442 PCT
Arst7g03059 7 76794342 76795442 Arst8g02408 8 33410796 33414273 PCT