Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03977 ATGTCCATATATACCGATAATAATCCACCACCGTTTCTTCCGCCATGTCATCACAGACAACCGCCAACGCCGATCCGCCTGTGGATCTTCGGGTACGGGCTGCAGTGCCTGCTGCACGTGGTGCTGGTGTGGCTCGAGTACCGCCGCCGGAACCAAAGGAATTCGCGGCGTCAGCGAAGGACGAGTGGCATAGAAAGCGAGGATGTTGATAGCTTTGAGGATGCCAACGATAGTGACGATGATGATGTTGGTGATGGAAACTCTTCTCACTCCGGATTCACAAAACGATGTGAGTCGTTTAATACGGGGATTTCATTCCTTTGGTGGATAGTGGGCTTTTACTGGGTTGTCTCTGGTGGTGATATACTTCTGCAAGATGCCCCACGCTTATACTGGTTGGCTGTTGTGTTTTTGGCATTTGACGTCTTCTTTGCTATCTTTTGTGTTGTTTTGGCATGCTTAATTGGCATTGCCCTCTGTTGTTGTTTGCCTTGCATCATTGCTATTCTCTATGCTGTTGCAGGACAGGAAGGTGCGTCAGAGGCAGATCTCAGTATAATTCCAAAATACAGATTTGAAATTTTAAGCGATGAGGAAAAGCCTACTGGGGGAGCTGGGAGAATGGTTCCCATTGAAACCAGTAGTGGATATGTTGCAAACGAACGGACACTTTTGCCAGAGGATGCGGAATGTTGCATATGCCTTTGTCCTTACGAGGATGGAACAGAGCTCCATGCTCTTCCGTGCAATCATCATTTTCATTCTTTATGCATAGTGAAATGGCTAAAGATGAATGCAACTTGTCCTCTTTGCAAGTACAATATTCTCAAAGGAAATGAACAAGTGTGA 849 0.4641 MSIYTDNNPPPFLPPCHHRQPPTPIRLWIFGYGLQCLLHVVLVWLEYRRRNQRNSRRQRRTSGIESEDVDSFEDANDSDDDDVGDGNSSHSGFTKRCESFNTGISFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSIIPKYRFEILSDEEKPTGGAGRMVPIETSSGYVANERTLLPEDAECCICLCPYEDGTELHALPCNHHFHSLCIVKWLKMNATCPLCKYNILKGNEQV 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03977 282 FunFam E3 ubiquitin protein ligase RIE1 211 279 - -
Arst5g03977 282 PANTHER TARGET OF ERK KINASE MPK-1 19 280 - -
Arst5g03977 282 SMART ring_2 231 271 IPR001841 -
Arst5g03977 282 Pfam Ring finger domain 230 272 IPR001841 -
Arst5g03977 282 ProSiteProfiles Zinc finger RING-type profile. 231 272 IPR001841 -
Arst5g03977 282 SUPERFAMILY RING/U-box 218 276 - -
Arst5g03977 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 210 280 IPR013083 -
Arst5g03977 282 MobiDBLite consensus disorder prediction 56 92 - -
Arst5g03977 282 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03977 Arst-Chr5 101020279 101032409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03977 17 281 C3H Transcription Factor Family AT1G68070 66.792 2.16e-129 369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03977 5 101020279 101032409 Arst5g03977 5 101020279 101032409 ECH