Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00520 ATGGCAGAAGACAGATATGAAACCTGTTCTGAAGGTTCTGCATGTTCTCAAATGGGAAGCAATAATAAGTGCAAGCATGTGTTTGATAGATTATGCGGTTTTGCACCTTCATGGAATTGGAACACAACCACCACAACCACACTACCACCACCACCAAGTGGCAGAAGAATCTTCCATAGAGATGTTGAAAAAGAAGCATTCCAATATGCAAGTAGTAGCCATTGCCTCTCATCCTACTACAGTGTCTTTGTTGTTCGCCTAGCAATCATGGTGATGCTAGCAATCTTGATAGGGCTACTTACTATTCTAACATGGCATTTCACCAAGATTTACACAACAAAATCACTCAAAACCCTGGCATATGATCTGCGTTACGAGCTTCTTCAACGCCCAATCTTGAGGATGTGGAACATTCTGAATTCTACGGCCGAGATCACCACGGCTCAGGTGAAGCTTTCTCAGTATGTGATCAGGCGTTACAGCAACCCTGTTAATCAAGCAGAGCAAGTTGAGCTGTATGAAGCAATGAGGGCTATAACATGGGCATTGTTTTCTAGTAAGAAAGCTCTGAACTCCATAACCATCAATTATAAGAATGGATTTGTCCAAGCTTTCCATAGAGATCTTAAGGATAACAACACATCTTACATCTATTCGGATCTCTCGAATTACTCTATGGTTGCTAATGAGATGAATTCCTTTTCGGCGCATCAGGCTTGGAATGATAAGGCCATTCATGGTAACAAATCAGCAATTTGGTACCGTGAGCCGCTTGATCCTGTCACTGGGGATAAGATTGGGAAAGCTATGAAGATTGCACCGGAAGACTTAATCAACATAGCTGGCCTTTCACAAGTACCTGATGGTGTGGCCTCATGGCATGTTGCAGTGAGCAAGTTCACTGATTCGCCATTGCTTTCAGCAGCATTACCTGTTTGGGATTCTTCTAATAAGAGTATTATGGCAGTTGTGGGTGTCACAACGGCGCTTTATAGCGTTGGACAGCTGATGAAGGAGCTAGTTGAGATGCACAGTGGTCACATGTACTTGACTTCACAAGAGGGTTACTTGCTTGCAACTTCCACAAATGCACCTCTGCTGACAAATTCAACAAAGCATCCAACGCTTAAGATGGCGGTTGATTGCGAAAATGAAGTGATCAAACTTGGTGCTGAGTGGTTGCAGAGAGCTTATGGAAACCATTCTCCTCCTAGTCATGAGGTTCATGTAGAAAATGCCAAGCTAGGCCACCAGCAATATTACATTGACTCTTTCTTCCTAAACTTGAAGAGACTTCCTTTGGTGGGGGTAATCATCATACCAAGAAAGTATATCATGGGGCAGGTTGATGAAAGAGCCTTCAAAACTTTGGTTATTCTAATATCTGCATCATTATGCATTCTAGTTATTGGATGTGTTTGCATTTTGATATTGACGAATGGAGTGTCGAAGGAAATGAAACTAAGAGCAGCATTGATAAGTCAGCTGGAAGCAAGAAGAAAGGCAGAGGCTTCAAGCAACTACAAAAGCCAATTTCTTGCGAACATGAGTCATGAATTAAGGACACCGATGGCAGCAGTAATTGGGTTGCTTGACATTCTTATATCTGATGACTGTCTCACAAATGAACAATACTCAACAGTTACTCAAATAAGAAAATGCTCAACTGCACTACTCCGTCTTCTTAACAACATCTTGGATCTTAGCAAGGTGGAATCAGGAAAACTAGTCCTAGAAGATGCAGAATTTGACTTGGGTCGTGAACTTGAAGGGCTTGTAGATATGTTTTCTGTCCAGTGCATTAACCACAATGTAGAGACTGTTTTAGATCTGTCTGATGAAATGCCAAAGGTAGTAAGGGGTGATTCTGCTAGGGTGGTTCAAATTTTTACAAATTTGATCAACAATTCAATAAAGTTTACTCCATCTGGTCACATCATTCTGCGAGGATGGTGCGAATACCCAAATTCTTGCAATGGTAGTCCAATTTTTCCACTTGAACAGAAGAAATCACGGTGTATACAAAAGGCTAGAGAGAAGCAAAATGCAAACAATGAAAAGAGAACAACTAAGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGATGACACAGGCTGTGGCATTGACCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTCGATTGCATGGAGGCACTGGTCTTGGTCTCTGCATTGTCAGAAACTTGGTCAATAAGATGGGCGGAGAAATCAAGGTTGTCAAAAAGGAGGGCCAAGGAACACTCATGAGATTATGCTTAGTTCTCAGTACACCTACTGATGTCACAGAGCAACATTATGCATTGGATTTTACTGACAATAGCTTAGTGGTACTTCTTGCACTGCATGGCAACATGAGTCGCTTGATTACTTCCAAGTGGTTACAGAAAAATGGGGTTTGCACTATAGAAGCATCTGAATGGAATGGACTAACACAGGTTTTGAGGGAACTCTTTCATGCAAGAAGTCCAGTCCATAATAACAATAACTTCGATGCACATTATCCAGTAACCGAGGGATTGAAGTCTAAATTACTCAGCATACAAGACATGAAGAAACCGGTTTTCGTCATTGTTGTGGACATTGGGCTACTTGACTTGAGCACAGACATATGGAAGGAACAGCTTAACTTCCTTCATAGATACTTTGGGAGAGCAAGGTTTGTGTGGATGCTAAATCATGACACATCCAATAACATAAAGATGGAGATTCGTCGGAAAGGGAATGTTTTGATGGTCAACAAACCCCTTTATAAAGCGAAAATGGTTCACATTTTGGAAGCAGTCATAAAGGAGAGAAATCTTGAGCTGCAAAAGAGAAATAATATGATTGGTCCAAGGACCACTACAAAAGAGGGCGAGTTGCATGAATTTCTTGAGATTGATTCTACTCATTTTGATGCTGGTAGCTCTGATGATTCGGACACTTCCGAAACGGTTGGTTCTAATCCTGTTAGTGTCGATGGAGATAAACAAATTGAATTGGTGGCTAGATCACCCGCATCATCAACATACAAGATCAATAACTGCTTAGTTGGATTAACCAATGAACATTTGGAAGATACTAACAATGCAAGGAAAGAAGAGTCATGTCAGAGTAGCCCCAGTTCTTCCAAACATGCCATTGAAGAAAGTGACCCTAAATCACTGTCCACTAAAGAACCATCTCAAGGTGGAGATTCTGAATGTGGCGAAACACATAGGGCCGCCGGCCCAAATAATAATGTGGTCAATGGAAAAAATTCTCTTGAAGGCCTGAGGATATTGCTTGCAGAAGATACTCCTGTGCTTCAAAGGGTAGCAACCATAATGCTTGAGAAAATGGGAGCTTCTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTAGATGCTCTCCATTGCAAGCTAGGTGTTGATGACTGCAGAAGGGATTCTCTCCAGAAGGAAAGAAACATGAGATCTCAAACAGAGATTTTGACTTCACCATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGTTATGAAGCAACAAAAGCAATAAGGAAATCAGAAGTGGGAACAGGATTGCATATTCCAATTGTTGCCCTTACAGCTCATGCAATGTCATGTGATGAAGCCAAATGCCTTGAAGTTGGCATGGATGCTTACTTAACAAAGCCAATTGACTTCAAGCAAATGGTGTCCACCATACTTTCACTCACCAAAAGAAAAACATCATGA 3756 0.4132 MAEDRYETCSEGSACSQMGSNNKCKHVFDRLCGFAPSWNWNTTTTTTLPPPPSGRRIFHRDVEKEAFQYASSSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLKTLAYDLRYELLQRPILRMWNILNSTAEITTAQVKLSQYVIRRYSNPVNQAEQVELYEAMRAITWALFSSKKALNSITINYKNGFVQAFHRDLKDNNTSYIYSDLSNYSMVANEMNSFSAHQAWNDKAIHGNKSAIWYREPLDPVTGDKIGKAMKIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTALYSVGQLMKELVEMHSGHMYLTSQEGYLLATSTNAPLLTNSTKHPTLKMAVDCENEVIKLGAEWLQRAYGNHSPPSHEVHVENAKLGHQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGQVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAALISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDEMPKVVRGDSARVVQIFTNLINNSIKFTPSGHIILRGWCEYPNSCNGSPIFPLEQKKSRCIQKAREKQNANNEKRTTKRDNKVILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVVKKEGQGTLMRLCLVLSTPTDVTEQHYALDFTDNSLVVLLALHGNMSRLITSKWLQKNGVCTIEASEWNGLTQVLRELFHARSPVHNNNNFDAHYPVTEGLKSKLLSIQDMKKPVFVIVVDIGLLDLSTDIWKEQLNFLHRYFGRARFVWMLNHDTSNNIKMEIRRKGNVLMVNKPLYKAKMVHILEAVIKERNLELQKRNNMIGPRTTTKEGELHEFLEIDSTHFDAGSSDDSDTSETVGSNPVSVDGDKQIELVARSPASSTYKINNCLVGLTNEHLEDTNNARKEESCQSSPSSSKHAIEESDPKSLSTKEPSQGGDSECGETHRAAGPNNNVVNGKNSLEGLRILLAEDTPVLQRVATIMLEKMGASVVAVGDGQQAVDALHCKLGVDDCRRDSLQKERNMRSQTEILTSPYDLILMDCQMPKMDGYEATKAIRKSEVGTGLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKQMVSTILSLTKRKTS 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00520 1251 SMART REC_2 1101 1242 IPR001789 GO:0000160
Arst5g00520 1251 Gene3D - 573 775 IPR036890 -
Arst5g00520 1251 ProSiteProfiles Histidine kinase domain profile. 515 773 IPR005467 -
Arst5g00520 1251 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 563 770 IPR036890 -
Arst5g00520 1251 Pfam His Kinase A (phospho-acceptor) domain 509 574 IPR003661 GO:0000155|GO:0007165
Arst5g00520 1251 Pfam Response regulator receiver domain 1103 1242 IPR001789 GO:0000160
Arst5g00520 1251 FunFam Histidine kinase 1-like protein 496 575 - -
Arst5g00520 1251 PANTHER TWO-COMPONENT HISTIDINE KINASE 69 778 - -
Arst5g00520 1251 Gene3D - 1083 1250 - -
Arst5g00520 1251 PRINTS Bacterial sensor protein C-terminal signature 698 712 IPR004358 GO:0016310|GO:0016772
Arst5g00520 1251 PRINTS Bacterial sensor protein C-terminal signature 757 770 IPR004358 GO:0016310|GO:0016772
Arst5g00520 1251 PRINTS Bacterial sensor protein C-terminal signature 716 726 IPR004358 GO:0016310|GO:0016772
Arst5g00520 1251 PRINTS Bacterial sensor protein C-terminal signature 733 751 IPR004358 GO:0016310|GO:0016772
Arst5g00520 1251 MobiDBLite consensus disorder prediction 981 1007 - -
Arst5g00520 1251 Coils Coil 666 686 - -
Arst5g00520 1251 SMART HisKA_10 508 574 IPR003661 GO:0000155|GO:0007165
Arst5g00520 1251 Gene3D - 476 572 - -
Arst5g00520 1251 ProSiteProfiles Response regulatory domain profile. 1102 1246 IPR001789 GO:0000160
Arst5g00520 1251 MobiDBLite consensus disorder prediction 1036 1093 - -
Arst5g00520 1251 SMART HKATPase_4 621 773 IPR003594 -
Arst5g00520 1251 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 621 771 IPR003594 -
Arst5g00520 1251 SUPERFAMILY CheY-like 1099 1248 IPR011006 -
Arst5g00520 1251 CDD REC_hyHK_CKI1_RcsC-like 1103 1242 - -
Arst5g00520 1251 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 496 575 IPR036097 GO:0000155|GO:0007165
Arst5g00520 1251 CDD HisKA 509 570 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00520 Arst-Chr5 4350951 4357113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00520 1 1247 Histidine Kinase Gene Family AT2G17820 63.183 0.0 1566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst5g00520 HATPase_c 3.2e-23 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00520 5 4350951 4357113 Arst5g00520 5 4350951 4357113 ECH