Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05949 ATGGATAATAATGGTTGCTTGCCATGTACACGTCGTGAAGGTTTTCCGGCTGGACTGAGAGTTCTGGTTGTTGATGATGATCCAACATGGCTCAAGATCCTTGAAAAGATGCTCAAGAAGTGCTCTTACCAAGTGACTACTTGTTGTTTGGCAACCGAGGCTCTGAAGAAGCTTCGAGAGAGGAAAGATGCATTCGACATAGTGATCAGCGATGTAAACATGCCTGACATGAATGGATTCAAGCTTCTTGAGCATGTTGGACTTGAGATGGATCTGCCTGTCATTATGATGTCTGTTGATGGAGAAACAAGCAGGGTAATGAAAGGTGTTCAACATGGAGCATGTGATTATCTCCTCAAGCCTATAAGGATGAAAGAACTGCGAAACATATGGCAGCATGTCTTGAGAAAAAGGATTCATGAAGGGAGAGAGTTTGAAAGCCTAGAGGGCTTTGATTTTGAGGGCATTCATCACTTGATGAGAAATGGACAAGATCAATGTTGTGATGATGTGAGCCTCTTTGCATTAGAAGATTGTATCAGTTCAACAAGGAAAAGGAAAGATACAGATAACAAACACGACGAAAGAGAATTCGGAGATTCTTCTTCAACCAAGAAAGCTAGAGTGGTTTGGTCTGTGGATCTTCATCAGAAGTTTGTCCAAGCAGTGAATCAGATTGGATTTGATAAAGTTGGTCCCAAGAAAATTCTAGATTTGATGAATGTACCATGGCTTACCAGAGAAAATGTTGCTAGTCATTTGCAGAAATACAGGCTCTACTTGAGTAGGTTGCAGAAGCAGAGAGATCAGAAGAAATGCTCTTCAAGTGGAATAAAGAATCCGGATTTGAATCCGAAAGATCCCGGAAGCTCTAGTATTAAGAACTCTATGAACAAGCAACAAAATGTAGTTTCAATTGACGGCTTCAGATGTCCAAATAATGGATTAGTGCAACTTCATGAATCCGATTTCACTGTGTCAGAGCTTAATAAAACAGAACAAAGAAGAGCACTGGCTACTAATAACATTATTCCTGATCCAAACATGACAAAGGTTTCACAGATAGTCCTTAATCAAACCTTTTCACCTCTCAATTCAGAAGGAAACATTGAAGTATTTGATTGCACCATACCAACACAGTACACTTGGAATCAAGTTCCCAAAAGGAAACTCCAAGATGATCCTAAATCACAATCAATTGCTTCAATGGTGTCCAGTCCCTCTGCTGCAAGCTCAATAGCTTCTTCTGCAGTTGACAACATTATTCCGGTTCAGTCCAAAAGCCTTATGGTGAATGATCAATCCTCAGTCACTTCAAATCCGGGCTTGAAAACACAGGAATTTGATGCCAGTCTCATTCCTGATCTGGAATTTTACCAGCAAAACCTACTCTGGGGTGGCGAGGCGGCTTTTTCGCCTTTGGAGGAGGACTTGAATTTCTTCTTGCTACAAAGTGAATGCTACAATGACATGAACTTTGGTATGCACAGCATAGACATGTCAGACTATTATTACGATCCAGGGCTTATTGCTGATGTTCCAAACCATTTATTATACGATTCAGCAGATTATTCAGTAGTAGATCAAAGTCTATTCATAGCATGA 1605 0.4044 MDNNGCLPCTRREGFPAGLRVLVVDDDPTWLKILEKMLKKCSYQVTTCCLATEALKKLRERKDAFDIVISDVNMPDMNGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKRIHEGREFESLEGFDFEGIHHLMRNGQDQCCDDVSLFALEDCISSTRKRKDTDNKHDEREFGDSSSTKKARVVWSVDLHQKFVQAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKQRDQKKCSSSGIKNPDLNPKDPGSSSIKNSMNKQQNVVSIDGFRCPNNGLVQLHESDFTVSELNKTEQRRALATNNIIPDPNMTKVSQIVLNQTFSPLNSEGNIEVFDCTIPTQYTWNQVPKRKLQDDPKSQSIASMVSSPSAASSIASSAVDNIIPVQSKSLMVNDQSSVTSNPGLKTQEFDASLIPDLEFYQQNLLWGGEAAFSPLEEDLNFFLLQSECYNDMNFGMHSIDMSDYYYDPGLIADVPNHLLYDSADYSVVDQSLFIA 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05949 534 SMART REC_2 19 131 IPR001789 GO:0000160
Arst3g05949 534 Pfam Response regulator receiver domain 21 130 IPR001789 GO:0000160
Arst3g05949 534 Pfam Myb-like DNA-binding domain 208 258 IPR001005 -
Arst3g05949 534 ProSiteProfiles Response regulatory domain profile. 20 135 IPR001789 GO:0000160
Arst3g05949 534 FunFam Two-component response regulator 202 265 - -
Arst3g05949 534 MobiDBLite consensus disorder prediction 270 297 - -
Arst3g05949 534 MobiDBLite consensus disorder prediction 276 297 - -
Arst3g05949 534 PIRSF RR_ARR_type-B 2 492 IPR017053 GO:0003677|GO:0003700|GO:0009736
Arst3g05949 534 NCBIfam myb-like DNA-binding domain, SHAQKYF class 206 259 IPR006447 GO:0003677
Arst3g05949 534 Gene3D - 19 166 - -
Arst3g05949 534 Gene3D - 202 270 - -
Arst3g05949 534 SUPERFAMILY CheY-like 18 143 IPR011006 -
Arst3g05949 534 CDD REC_typeB_ARR-like 21 135 - -
Arst3g05949 534 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 323 IPR045279 GO:0009736
Arst3g05949 534 SUPERFAMILY Homeodomain-like 204 263 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05949 Arst-Chr3 133088274 133090929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05949 15 271 Response Regulator Gene Family AT2G25180 54.545 1.53e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Arst3g05949 Response_reg 1.6e-24 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05949 3 133088274 133090929 Arst3g05949 3 133088274 133090929 ECH
Arst10g00952 10 9074602 9077859 Arst3g05949 3 133088274 133090929 PCT