Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05838 ATGGATGATGATATGTTGAACATGACCAATTGGGGATACTATGAACCCTTCAAAGGAGGGCATCTTGGCCTGCAGCTCATGCCTGGTATGACAGATCGTGACACAAAACCATTTATGCCTGGTCGTGATCCAACTATGTTAGTTAATACAAATGGAACCTTTCACCCTCGAGACTGTGTAGTTTCCGAAGCACAAATGCCAATCAACTATGTGAGGGATAGTTGGATAAGCCAGCGAGATAGGTTTTTCAATATGCAGCCTACCAATCCCAATTATCCTGTTCTTCCGGAAACTTCAGCCGCCCCAACACAAATTACACAGCCACCTGATACATCAAGAGATGAGAAGGCTGATATAGTTGAAGAAACAGTGCAAAAGGAAGGAGTCCAACCAAGGAAACGGCAGGGTAGGGTTGCCTCAACAACTCCAAAAGCGAAGAAACCAAGGAAGCCGAAGGATAACAGCAATGCTCCTGTCCAAAGATCGAAGCCCATGAAGACAATTGAGTTTGTAATAAATGGAATTGATATGGATATTTCCAGTTTACCCATTCCAGTTTGTTCATGTACCGGGACTCCGCAGCAGTGTTATCGCTGGGGATGTGGAGGATGGCAGTCTGCTTGTTGTACTACAAATGTGTCGACATATCCATTGCCAATGAGCATGAAACGACGTGGGGCAAGGATAGCTGGACGGAAAATGAGCCAGGGTGCTTTTAAGAAGGTATTAGAGAAACTAGCAGCCGAAGGCTATAATTTTGGTAACCCAATTGACCTGAGGAATCACTGGGCTAGACATGGCACCAACAAATTTGTCACTATCAGGTAG 828 0.4493 MDDDMLNMTNWGYYEPFKGGHLGLQLMPGMTDRDTKPFMPGRDPTMLVNTNGTFHPRDCVVSEAQMPINYVRDSWISQRDRFFNMQPTNPNYPVLPETSAAPTQITQPPDTSRDEKADIVEETVQKEGVQPRKRQGRVASTTPKAKKPRKPKDNSNAPVQRSKPMKTIEFVINGIDMDISSLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSTYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFGNPIDLRNHWARHGTNKFVTIR 275
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05838 275 Pfam GAGA binding protein-like family 1 275 IPR010409 -
Arst3g05838 275 MobiDBLite consensus disorder prediction 87 110 - -
Arst3g05838 275 MobiDBLite consensus disorder prediction 111 133 - -
Arst3g05838 275 PANTHER - 1 275 IPR010409 -
Arst3g05838 275 SMART GAGA_bind_2 1 275 IPR010409 -
Arst3g05838 275 MobiDBLite consensus disorder prediction 87 165 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst3g05838 Arst-Chr3 131937655 131939777 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05838 1 275 BBR or BPC Transcription factor family AT2G01930 56.811 5.24e-102 297
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Arst3g05838 GAGA_bind 2.1e-101 No_clan
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05838 3 131937655 131939777 Arst3g05838 3 131937655 131939777 ECH