Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05254 ATGATGGAGTCTTCGAAGGCTCTGCGGTTCATAACACACCAATCGTTGTTCTCGACCGTTCGATCTGGGAACCTTGATGAGCTGAAGAAGCTGGGAGCAGCTAATCTGAAGGACGTGTTCAGCTTCTTGCTCAAACTCTGTGACTTCGAGATAGTGAAGATCAGGTCCAAGTCTGACATGAACGCCTTTCATGTTGCAGCCAAGCGTGGTCATCTTGATATTGTGAGGGAGTTTTTGAGTACTTGGCCAGAGCTTTGTAAGTTATGTGACTCATCAAACACCAGCCCGCTATATGCGGCTGCTGTTCAAGATCATCTGGATGTGGTCAATGCTATCTTGGATGTGGACGCCAGTTCCATGATGATAGTTAGGAAAAATGGGAAAACTTCCCTGCACAATGCTGCTAGGTATGGTATGGTTCGAATTGTGAAAGTTCTTATTGCCCGGGATCCAGCAATAGTCTCCATCAAAGATAAAAAAGGTCAAACTGCACTTCACATGGCTGTCAAAGGACAGTGTAGTGCAGTGGTGGAGGAGATATTACAAGCTGATCCAACTATACTGAACGAACGGGACAAGAAAGGCAATACAGCTCTTCACATGGCTACTAGGAAAGGCCGTGAGCAGATTGTGGCCCTTTTGCTATGCTATACCGCCATGGAAGTTAACGCCATCAATAAGCAGCAGGAAACAGCTTTGGATTTGGCAGATAAACTGCCGTATGGAGATCCGTCTTTGGTAATTAAGGAAGCCCTTGCAGAGTATGGTGCCAAGCATGCCAGGAATGTCGGAAAAATAGATGAAGCCATGGAACTCAAAAGAACTGTCAGTGACATAAAACATGAGGTGCAGTCACAACTTATACAAAATGAAACTACTCGTAGACGAGTTTCTGGAATTGCCAAGGAACTGAAGAAACTTCATAGGGAAGCAGTTCAGAACACCATTAATTCTGTCACAGTCGTGGCTGTCCTTTTTGCCTCAATAGCATTCCTGGCCATATTCAATTTGCCTGGTCAGTATATAACAGGAGGATCAGATGCAGGGAAGGCCAATATTGCCAATCGTCTTGGCTTCAAAGTTTTCTGCCTTCTGAATTCTACATCTCTCTTCATCTCACTTGCAGTCGTCGTAGTTCAAATCACTTTAGTAGCATGGGACACAAGGGCTCAAAGGCAGGTTGTATCAGTGGTTAACAAGCTAATGTGGGCTGCATGTGCTTGCACATGTGGTGCTTTTCTTGCAATAGCTTTTGAAGTTGTTGGAGAACACACATGGATGGCCTTGACCATCACCATTTTGGGAGTACCAATTCTAGTTGGAACACTAGCAAGCTTGTGCTACTTTGTTTTTCGACAACATTTTGGTGTTTTCCGCAGCGATTCACAGAGGCGAATCAAGAGAGCTAGCGGAAGCAAATCTTTTTCATGGTCGTACTCTGCAAATATATCAGACTTGGACGAATATAATTCCGACATTGAAAAGATCTATGCTCTGTGA 1500 0.444 MMESSKALRFITHQSLFSTVRSGNLDELKKLVXAANLKDVFSFLLKLCDFEIVKIRSKSDMNAFHVAAKRGHLDIVREFLSTWPELCKLCDSSNTSPLYAAAVQDHLDVVNAILDVDASSMMIVRKNGKTSLHNAARYGMVRIVKVLIARDPAIVSIKDKKGQTALHMAVKGQCSAVVEEILQADPTILNERDKKGNTALHMATRKGREQIVALLLCYTAMEVNAINKQQETALDLADKLPYGDPSLVIKEALAEYGAKHARNVGKIDEAMELKRTVSDIKHEVQSQLIQNETTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYITGGSDAGKANIANRLGFKVFCLLNSTSLFISLAVVVVQITLVAWDTRAQRQVVSVVNKLMWAACACTCGAFLAIAFEVVGEHTWMALTITILGVPILVGTLASLCYFVFRQHFGVFRSDSQRRIKRASGSKSFSWSYSANISDLDEYNSDIEKIYAL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05254 500 Gene3D - 7 273 IPR036770 -
Arst3g05254 500 Pfam Domain of unknown function 311 418 IPR026961 -
Arst3g05254 500 ProSiteProfiles Ankyrin repeat profile. 195 228 IPR002110 GO:0005515
Arst3g05254 500 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 36 479 - -
Arst3g05254 500 ProSiteProfiles Ankyrin repeat region circular profile. 127 148 - -
Arst3g05254 500 SUPERFAMILY Ankyrin repeat 16 240 IPR036770 -
Arst3g05254 500 Pfam Ankyrin repeats (3 copies) 161 225 IPR002110 GO:0005515
Arst3g05254 500 Pfam Ankyrin repeats (3 copies) 33 116 IPR002110 GO:0005515
Arst3g05254 500 ProSiteProfiles Ankyrin repeat region circular profile. 195 216 - -
Arst3g05254 500 ProSiteProfiles Ankyrin repeat profile. 127 159 IPR002110 GO:0005515
Arst3g05254 500 SMART ANK_2a 127 156 IPR002110 GO:0005515
Arst3g05254 500 SMART ANK_2a 161 190 IPR002110 GO:0005515
Arst3g05254 500 SMART ANK_2a 195 225 IPR002110 GO:0005515
Arst3g05254 500 SMART ANK_2a 93 123 IPR002110 GO:0005515
Arst3g05254 500 SMART ANK_2a 59 88 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05254 Arst-Chr3 127741896 127744706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05254 6 500 Miscellaneous Gene Families AT2G01680 67.978 0.0 709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05254 3 127741896 127744706 Arst3g05254 3 127741896 127744706 ECH