Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05247 ACGCACCTGCGTCCGCTAACATGCGCCGCCTCATCGTCCTACCCTGCGCGACTGGTTCCCCACCCACCGGACCTCATCAAGTGGGTTACCAGAGAAGGCGGCTTCGTCCACCCTGCCATCAAGATAGCACTTCATCCCTCCCACGGTCTCGGCTTACTCGCCAACCAACAAATCCCCAAGGGTTCCGACCTTATCGTTCTCCCCGACCACATTCCCTTGAGGTTTAACCACCAAGACGCCACCCACTCTCTCCTCCTTCAGTTGGCACGCCATGTTCCTGAGGAACTGTGGGCCATGAGGCTAGGTTTGAAGCTGCTTCAAGAAAGAGCTAAAGTTGGATCCTTTTGGTGGCCATACATCAGCAATCTCCCGGAAACATACACTGTCCCTATCTTCTTTCCCGGAGAGGATATAAAGAACTTGCAGTATGCTCCTCTTCTTCACCAGGTGAACAAAAGATGTCGGTTTCTTCTTGATTTTGAGCAAGAAGTCAAGCATGCCTTAGTCAATCTCACACCAGATAAGCATCCTTTTGGTGGCCAAGAAGTAGATGCATCTTCTCTTGGATGGGCTATGTCAGCAGTCTCATCAAGAGCATTCCGTTTATATGGTGACAAACAGCCAGATGGGATCCATATTGACATACCTATGATGCTCCCTCTGATTGATATGTGCAATCATAGTTTCAATCCAAATGCCAGAATTGTTCAGGAAAAAGACTCTAGTAGCAAAAAAATGCAAGTGAAGGTTGTGGCTGAGACAGCAATCAAAGAAGATGATCCTTTATTACTTAACTATGGCTGTCTAAACAATGATTTTTTCCTTCTTGATTATGGATTTGTGATACAATCAAACCCGTATGACTGCATTGAACTGAAATACGATGGTGCTCTTTTGGATGCTGCAAGCTCAGCAGCTGGAGTTTCATCACCAAATTTCTCAGCACCTGCTCCATGGCAGGAACAGATTCTTGCTCAGCTAAATCTTGCTGGGGAAGCTTCAGATCTCAAGGTGAGCATTGGTGGTGAAGATGTAGTAGAGGGGCGTTTGTTGGCTGCATTGAGAGTACTCCTTTCAAGTAGTATGGAAACCGTGCGGAAGCATGACCTCAACACACTCAAGTCTTTATCAGCCGAAGCCCCGCTGGGTGTTGCAAATGAGACAGCTGTCTTACGTACGCTTATAGCTCTGTGTGTGATTGCACTGGGACACTTCCCCACCAAAATAATGGATGATGAATCACTGCTGAAACAGGGTGCCTTAGGTTCAACGGAATTGGCCATTCAATACAGAATCCAAAAGAAATATGTGATTGTTGATGCCATGAGATCTCTCTCAAGGAGGGTAAAGCTTCTCTCTTTCAAGGAAACAACAGTGAGTGCCGAAGGCTAA 1392 0.4677 MATSKAVMASLTHLRPLTCAASSSYPARLVPHPPDLIKWVTREGGFVHPAIKIALHPSHGLGLLANQQIPKGSDLIVLPDHIPLRFNHQDATHSLLLQLARHVPEELWAMRLGLKLLQERAKVGSFWWPYISNLPETYTVPIFFPGEDIKNLQYAPLLHQVNKRCRFLLDFEQEVKHALVNLTPDKHPFGGQEVDASSLGWAMSAVSSRAFRLYGDKQPDGIHIDIPMMLPLIDMCNHSFNPNARIVQEKDSSSKKMQVKVVAETAIKEDDPLLLNYGCLNNDFFLLDYGFVIQSNPYDCIELKYDGALLDAASSAAGVSSPNFSAPAPWQEQILAQLNLAGEASDLKVSIGGEDVVEGRLLAALRVLLSSSMETVRKHDLNTLKSLSAEAPLGVANETAVLRTLIALCVIALGHFPTKIMDDESLLKQGALGSTELAIQYRIQKKYVIVDAMRSLSRRVKLLSFKETTVSAEG 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05247 474 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 288 462 IPR036464 -
Arst3g05247 474 Pfam Rubisco LSMT substrate-binding 326 448 IPR015353 -
Arst3g05247 474 Gene3D set domain protein methyltransferase, domain 1 3 291 - -
Arst3g05247 474 ProSiteProfiles SET domain profile. 49 278 IPR001214 GO:0005515
Arst3g05247 474 Gene3D - 323 465 IPR036464 -
Arst3g05247 474 FunFam SET domain containing protein 314 467 - -
Arst3g05247 474 FunFam Histone-lysine N-methyltransferase setd3 3 291 - -
Arst3g05247 474 SUPERFAMILY SET domain 31 296 IPR046341 -
Arst3g05247 474 CDD SET_LSMT 50 292 - -
Arst3g05247 474 Pfam SET domain 60 278 IPR001214 GO:0005515
Arst3g05247 474 SMART set_7 49 284 IPR001214 GO:0005515
Arst3g05247 474 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 32 438 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst3g05247 SET 2.8e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05247 3 127675053 127678207 Arst3g05247 3 127675053 127678207 ECH