Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05239 ATGGAGAGAGATTTCATGGGTCTAAGCTCAAAGGAGCCACTTGTGGTCAAAGAAGAGATCAACGATGATGGCTCCAAAGATTCTGGCTTCACCAAGGGCTCTACTGCTCAGTGGCTTTTCTCAAGCAAAGTCTCTGCTGTTCCACACTTGATGTCTTTTAAGGTTTCTCAAGATGAGAAGCCTTTTGACTCCACTCTAAAGTTCCCTGCTCCTGAACTTCAGAAATCTTTCAATCACAATGGACAAGGTGGCTTTCATTTTTCCATGACTCCGTATCCTGTACAACATGATGTGAATTCTGTGAATCGTCCTCACGATGTGAAGATGTTTTCAGTTTCCAATCAAGCAATTTCAGTTTCTGTGGGGAATCCATACCTGAAGAATCACTTTGCATCGGCTGCTCAGAATATAGGCAGTGCTAATGTGAAGCAGACATTACTTGGGGGAATACCAATTACACCAACCATCGGTGCTGTTGCTGAACGCAATGTGAAAACAGCTCCACCTTCTGCACAACTTACAATCTTCTATGCGGGTACTGTTAATGTCTTCCAAGATATCTCTGCTGAAAAGGCACAAGCTATTATGTTGTTGGCTGGCAATGAGTTGGCACAGCCCAAGGTTCAGGCAGGTGGTTCAAAATTGGGAGCCGGTGATAGTGTGGCTGTTAATACACCACCTAGCTCCGGTGTTCCAAGTCCTTTATCCGTCTCATCGCATTCGGGTGCGCAGTCAGGGAGTGGCTCCACTAGTACTGATGAATTTCTGACTGCTAAAACGACCGGGGTTCCCACCGGTTCTGTTAGTAAGGTGGAGCCTCCAAAAGTAGTGAGCGCAACCACTATGTTGACTTCAGCTGTGCCACAGGCTCGTAAAGCATCGTTGGCTCGTTTTCTAGAGAAGCGCAAGGAGAGGGTGATGAATTCAGCACCATATAACCTGAACAAGAAGAGTGAGGAATATGGCACTGCAGAACACAATGGTGCTACCAGCATTGCTTCAAATGCTCTACCACTACAAGTGAAGCAAGGATAG 1035 0.4609 MERDFMGLSSKEPLVVKEEINDDGSKDSGFTKGSTAQWLFSSKVSAVPHLMSFKVSQDEKPFDSTLKFPAPELQKSFNHNGQGGFHFSMTPYPVQHDVNSVNRPHDVKMFSVSNQAISVSVGNPYLKNHFASAAQNIGSANVKQTLLGGIPITPTIGAVAERNVKTAPPSAQLTIFYAGTVNVFQDISAEKAQAIMLLAGNELAQPKVQAGGSKLGAGDSVAVNTPPSSGVPSPLSVSSHSGAQSGSGSTSTDEFLTAKTTGVPTGSVSKVEPPKVVSATTMLTSAVPQARKASLARFLEKRKERVMNSAPYNLNKKSEEYGTAEHNGATSIASNALPLQVKQG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05239 344 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 67 320 IPR040390 -
Arst3g05239 344 ProSiteProfiles Tify domain profile. 166 201 IPR010399 -
Arst3g05239 344 MobiDBLite consensus disorder prediction 222 254 - -
Arst3g05239 344 MobiDBLite consensus disorder prediction 218 254 - -
Arst3g05239 344 Pfam tify domain 168 200 IPR010399 -
Arst3g05239 344 SMART tify_2 166 201 IPR010399 -
Arst3g05239 344 Pfam Jas motif 288 312 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05239 Arst-Chr3 127607993 127610445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05239 38 318 Tify Gene Family AT3G17860 34.062 6.03e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Arst3g05239 tify 3.9e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05239 3 127607993 127610445 Arst3g05239 3 127607993 127610445 ECH