Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02259 ATGAAGCTCAACCCACTCGTTTCTAGCCTCTCCCTTTACGATATCGCCGGCACCCCCGGCGTCGCCGCTGATGTCAGCCACGTCAACACCAGATCTGAGGTCGCTGGATATCAAGGTGAAGGAGAGCTTGGAAAAGCTTTGGAGGGAGCTGACGTCGTTATAATCCCAGCTGGTGTTCCCAGGAAGCCTGGAATGACTCGCGATGATCTCTTCAACATTAATGCCGGCATTGTCAAGTCTCTGTGCACTGCTATTTCCAAGTACTGCCCCAAGGCCCTTGTTAACATGATTAGCAATCCTGTGAACTCCACTGTTCCCATTGCTGCCGAGGTTTTCAAGAAGGCAGGAACATATGATGAGAAGAGGTTGTTTGGGGTCACCACCCTTGATGTTGTTAGGGCAAAAACTTTCTATGCTGGAAAGGCCAATGTTCCGGTTGCTGGGGTCAATGTACCGGTTGTAGGTGGCCATGCAGGCATCACTATTCTGCCATTATTTTCTCAAGCAACACCGAAAGCCAATTTGGATCATGATGTCATAGTAGCTCTTACGAAGAGAACACAAGATGGTGGAACGGAAGTTGTTGAAGCCAAGGCAGGAAAGGGTTCTGCAACTTTGTCAATGGCCTATGCCGGAGCCCTCTTTGCCGACGCTTGTCTCAAGGGCCTCAATGGTGTCCCAGATGTTGTTGAGTGCTCATTTGTGCAATCTAATGTCACTGAACTTCCTTTCTTCGCTTCAAAGGTGAGACTCGGAAAGAACGGTGTGGAGGAAGTTCTGGGATTGGGGGCTCTTTCAGATTATGAGAAACAAGGCCTTGAAAACCTTAAGCCTGAGCTCTTGGCATCTATTGAGAAGGGAATCAAATTCGCCAAGCAATAA 882 0.4875 MKLNPLVSSLSLYDIAGTPGVAADVSHVNTRSEVAGYQGEGELGKALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAISKYCPKALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKANVPVAGVNVPVVGGHAGITILPLFSQATPKANLDHDVIVALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPDVVECSFVQSNVTELPFFASKVRLGKNGVEEVLGLGALSDYEKQGLENLKPELLASIEKGIKFAKQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02259 293 FunFam Malate dehydrogenase 1 126 - -
Arst3g02259 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 125 IPR036291 -
Arst3g02259 293 CDD MDH_glyoxysomal_mitochondrial 1 291 IPR010097 GO:0006099|GO:0030060
Arst3g02259 293 PANTHER MALATE AND LACTATE DEHYDROGENASE 1 293 - -
Arst3g02259 293 FunFam Malate dehydrogenase 127 293 - -
Arst3g02259 293 PIRSF Lac_mal_DH 4 291 IPR001557 GO:0016616|GO:0019752
Arst3g02259 293 Pfam lactate/malate dehydrogenase, NAD binding domain 2 125 IPR001236 GO:0016491
Arst3g02259 293 Gene3D - 127 293 IPR015955 GO:0003824|GO:0016616
Arst3g02259 293 SUPERFAMILY LDH C-terminal domain-like 126 292 IPR015955 GO:0003824|GO:0016616
Arst3g02259 293 ProSitePatterns Malate dehydrogenase active site signature. 126 138 IPR001252 GO:0006108|GO:0016615
Arst3g02259 293 Gene3D - 1 126 - -
Arst3g02259 293 NCBIfam malate dehydrogenase 2 292 IPR010097 GO:0006099|GO:0030060
Arst3g02259 293 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 127 290 IPR022383 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02259 Arst-Chr3 28862422 28864598 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02259 3 28862422 28864598 Arst3g02259 3 28862422 28864598 ECH