Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1201 ATGGTAGGTTTGAGAGTAGAGGTAGCTAATGCTCAGTTATATAGAAAAATTGGAGAGAAACTCCTCCCTTACTGGACCATAGTGGTGGATCCATCAGGGCATGGAAACTTCTCTACCATACAAGCTGCCATTGATTCAGTCCCTTCTAACAATAGGTATTGGGTTTCCATCAAGGTGAAGGCAGGCACCTACAGAGAAAAAGTGAAGATTCCTAATGATAAGCCTAACATCATACTAAAAGGAGAGGGAAAGAGGAAAACTTTTGTTGAGTGGGATGATCATGACACTACCTCACAGAGTCCTACGTTCGCAGCCATGGCTGACAATACTGTTGTCAAATCCATGAGCTTTAGGAACTCATACAACAATCCAATAAACAATAAACCGAAGGTACCTGCCGTAGCTGCGATGATAAGCGGCGACAAATCTTATTTTTATAGAGTTGGCTTCTTTGGTTTGCAAGACACTTTGTGGGACGACGCAGGAAGACATTACTACAAGCTTTGTACCATTCAAGGGGCTATTGATTTTATCTTTGGTGCAGCCCAGTCTTTATTTGAGAGGTGTTCCATATCTGTCATTGGTGCAGCTCTAGATCCTGGGCTTCCAGGTTTTATTACAGCGCAAGGGAGAACAAATCCAAATGATGCAAATGGGTTTGTTTTCAAAGACTGTCATGTGTTTGGAAATGGCACAACTTACTTGGGAAGGCCTTGGAGAAGTTACGCTAAAGTTTTGTTCTACAACACCAGCATGTCCAACGTTGTACAACCTTCTGGGTGGGACGCATGGCATTTCGTTGGACACGAGAATCGCATAACATTTGTGGAGTATGGGAATTTTGGAGCTGGTTCTAACACTTCCAAGCGAGTGAGTTGGACTAAGAAGTTGGGTTTAAAAGCAATTCAGAAGATGTCAAGTATGAACTTCATTGACACTGAAGGATGGCTTCAGAACCAACAGTTCTAA 969 0.4262 MVGLRVEVANAQLYRKIGEKLLPYWTIVVDPSGHGNFSTIQAAIDSVPSNNRYWVSIKVKAGTYREKVKIPNDKPNIILKGEGKRKTFVEWDDHDTTSQSPTFAAMADNTVVKSMSFRNSYNNPINNKPKVPAVAAMISGDKSYFYRVGFFGLQDTLWDDAGRHYYKLCTIQGAIDFIFGAAQSLFERCSISVIGAALDPGLPGFITAQGRTNPNDANGFVFKDCHVFGNGTTYLGRPWRSYAKVLFYNTSMSNVVQPSGWDAWHFVGHENRITFVEYGNFGAGSNTSKRVSWTKKLGLKAIQKMSSMNFIDTEGWLQNQQF* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1201 322 SUPERFAMILY Pectin lyase-like 24 318 IPR011050 -
Apr7g1201 322 Pfam Pectinesterase 27 312 IPR000070 GO:0030599|GO:0042545
Apr7g1201 322 ProSitePatterns Pectinesterase signature 2. 171 180 IPR033131 -
Apr7g1201 322 PANTHER PECTINESTERASE 10-RELATED 18 321 - -
Apr7g1201 322 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 18 321 - -
Apr7g1201 322 Gene3D - 24 322 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1201 Apr-Chr7 18979268 18982014 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1201 26 270 Carbohydrate Esterase AT2G19150 47.154 2.15e-78 239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1201 7 18979268 18982014 Apr7g1201 7 18979268 18982014 ECH