Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1192 ATGATTGGAGGTAAAGATCTTCTTCCCAATGGTGTTGACTACTCTGAGGGTGAGAACTCAAAGCAGAGTTTTGTTCATGGCAAGGATCACCCACAAGAGAAAAAACTGAATAATAGCACAATTCTCAAAGATTCAGAGGTGTGTGTTGATGGATTTAAGTCAATACCCGCAAAAGTTGGAGCTTGTGGGTTGCAAGAGTTGACCCTGAGCTACCTCTGTGATTACCCCAAATTGGGTCTTGTTCAGAAAGAGGTTGCTGCTAGAAAAGGCAAAGAGGTTGTGGTTTGTGAGAATTCAAATGAAGATGAGAAATGGGTAGAGAGGGATTTCTTGAGTTTAAGTGAAACTAAGGAGAATTCTTCAAAGAGATCCATTGGGGAAGATTGTGAAAGGGAAAAAGATAGAGGCAACAACAAGAAGCAGAAGCTCGAAACTCTTAATCTCTCTCTTGCTTTGCCTGATGTGTCACTCTCTCTCACAGCCTCAAACGCTCTACAAAATGGTGACCGACCAATTAGGCCAAAGGCTAGTAAGCGACCAACCACCACACTGAATTCATGTTCAAATGATTACACAGCAGCTTCTTTATCTTACTCTTATTCTCACCCCTTCTCACACAACCCAAGTTGCTCCCTCACCCGCAATTCAACTGAGAACTTTGAGTATTCTGTGAGCAAGGATGACCAAATCTGGTATTGTGGGGAGGGGACTAATGGGTCAGTTCATAGTAGGTTCAAGCCAATAGGAGATGGTGTTGCTTTGGCAAATCATTCATTTATGCAAGGGAATATTCAGCATAAAACTGCTAGTTCAGATAACCAATCCCTTTTCCCTTCAGAATTGCCTGCAAGACCAGGATTTGAGACTCATTCAGAGGGTTCAAGGGGAAAGAATTCTGAGAGAGGCTTGGAAGGTGTGGTGGGTGGTGTGAAAACGATGAAGCCTTCTACATCAGAGAGAATTCTAAGAGAAATAGTTTCTGAGTCTATCCCAGCCATGGCAATGACATTTAAAGAGTTCTCCTATGAAGTCATAGCATCAATTAAGGAACACTTGAAGAGTCTCTTTGAAATTCCTGAGAAGAAAGAGGAGTTAGTGAACCTACAGAACCGGCTTGAGCGAAGATCTGACCTCACCAAAGGGACTCTCTCAAAGTGTCACAAAGAGCAGTTGGAGATTTTGGTTGCTATCAAGATGGGCCTTGCAAGTTTCTTGTCTGCTAAGTTGCAATTCTCTGAGATGGTACAAGTTTTCTTGTACATGAGATGTAGAAATGTGAACTGCAAGAGCTTGCTTCCTGTTGATGATTGTGACTGCAAGATTTGCTCAGGGAATAAGGGGTTTTGCAGTTCTTGCATGTGTCCAATTTGTTTGAACTTTGATTGTGCGAGTAACACTTGTAGTTGGGTGGGTTGTGATGTTTGTTTCCACTGGTGTCATGCCGCTTGTGGCATTCAGAGGAATCTAATCAAACCTGGTCCTAGCTTGAAGGGTCCTTTGGGGACCTCTGAGATGCAGTTTCATTGTATTGGCTGTGGACATGCTTCCGAAATGTTTGGGTTTGTTAAGGATGTTTTCATGTGTTGTGCCAAGGACTGGGGCTTAGAAACCTTAATCAAAGAGCTCGACTATGTAAGAAGGATTTTCAAGGGAAGTGAAGATTGCAAAGGGAAGGAATTGCATATTAAAACCGATGATATGCTGTTAAAGCTTCAAGCTAAACTGGTGTCCCCTTCGGATGCCTGCAATTACATCATGCAGTTTTTCAGCTATGCGGATGGCATGTCAGAAATTCCTGCATGTGGTAAATCCTCAAAGGATTTGTCAACAGCTAAGGCTAACCATACAATGGACAGAACATGTCTCTCACAATCTGCTTCTCTGATAGCAAAATACACTAATGATGACATGAGCTACTCTAAGTCAAATGATCACCAACAGAAGGACCTCAAAACCTCATTAAGTGAACTTAAAAATGAGAATGATTTGCAATTGTTAAGGAAAGGTGGTGTTGAAAGCTTGGAGTGCATGGTGCGAATAAAAGAGGCCGAAGCCAGAATGTTCCAAACGAAAGCAGATGAGGCAAGGAAAGAGGCAGAAGGGTTCCAAAGGATGATAAAGACAAAGGCTGCACAGATGGAAGAAGAGTATGCTGAAAGGCTTGGAAAGCTTTGCTTCCATGAGGCCCAGGAAATGAGAAAGAAGAAGCTTCAGGAATTCAATGTCTTAAAAGATTCTCACTTTGATTACTTCAACATGAAAAGTAGAATGCAAGATGAGGTTGGTGGTTTGCTCAAGAGAATGGAATTGGAAGCAACCAAGCAGCAGTGGGTTTAG 2337 0.4232 MIGGKDLLPNGVDYSEGENSKQSFVHGKDHPQEKKLNNSTILKDSEVCVDGFKSIPAKVGACGLQELTLSYLCDYPKLGLVQKEVAARKGKEVVVCENSNEDEKWVERDFLSLSETKENSSKRSIGEDCEREKDRGNNKKQKLETLNLSLALPDVSLSLTASNALQNGDRPIRPKASKRPTTTLNSCSNDYTAASLSYSYSHPFSHNPSCSLTRNSTENFEYSVSKDDQIWYCGEGTNGSVHSRFKPIGDGVALANHSFMQGNIQHKTASSDNQSLFPSELPARPGFETHSEGSRGKNSERGLEGVVGGVKTMKPSTSERILREIVSESIPAMAMTFKEFSYEVIASIKEHLKSLFEIPEKKEELVNLQNRLERRSDLTKGTLSKCHKEQLEILVAIKMGLASFLSAKLQFSEMVQVFLYMRCRNVNCKSLLPVDDCDCKICSGNKGFCSSCMCPICLNFDCASNTCSWVGCDVCFHWCHAACGIQRNLIKPGPSLKGPLGTSEMQFHCIGCGHASEMFGFVKDVFMCCAKDWGLETLIKELDYVRRIFKGSEDCKGKELHIKTDDMLLKLQAKLVSPSDACNYIMQFFSYADGMSEIPACGKSSKDLSTAKANHTMDRTCLSQSASLIAKYTNDDMSYSKSNDHQQKDLKTSLSELKNENDLQLLRKGGVESLECMVRIKEAEARMFQTKADEARKEAEGFQRMIKTKAAQMEEEYAERLGKLCFHEAQEMRKKKLQEFNVLKDSHFDYFNMKSRMQDEVGGLLKRMELEATKQQWV* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1192 778 MobiDBLite consensus disorder prediction 22 37 - -
Apr7g1192 778 CDD PHD_OBE1_like 453 512 - -
Apr7g1192 778 MobiDBLite consensus disorder prediction 268 302 - -
Apr7g1192 778 MobiDBLite consensus disorder prediction 165 184 - -
Apr7g1192 778 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 336 358 IPR004082 -
Apr7g1192 778 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 375 390 IPR004082 -
Apr7g1192 778 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 414 435 IPR004082 -
Apr7g1192 778 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 460 480 IPR004082 -
Apr7g1192 778 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 533 552 IPR004082 -
Apr7g1192 778 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 672 692 IPR004082 -
Apr7g1192 778 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 711 733 IPR004082 -
Apr7g1192 778 Pfam Coiled-coil region of Oberon 642 765 IPR032535 -
Apr7g1192 778 Coils Coil 678 700 - -
Apr7g1192 778 Pfam PHD - plant homeodomain finger protein 423 547 IPR032881 -
Apr7g1192 778 MobiDBLite consensus disorder prediction 1 37 - -
Apr7g1192 778 PANTHER PROTEIN OBERON 3 17 778 - -
Apr7g1192 778 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 17 778 IPR004082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1192 Apr-Chr7 18862012 18864824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1192 345 552 PHD Gene Family AT5G57380 22.321 6.38e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1192 7 18862012 18864824 Apr7g1192 7 18862012 18864824 ECH