Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0183 ATGTCATCACAAACCGCCGCTACGGACGTGCCGGAGGCCCACGCACCGCTGCTCCGCGCTCGCCACGATGTTACGCGAACCCCTGCGCTCGCGCTCCTTCTCGGCCGCGCCGGGCGCCGCGGCCCCTCCATGCTGGTGCGGGAGACGGCGGCGCGTGAGCTCGAGGAGCGCCGCGCCGACTGGGGCTACTCAAAGCCCGTGGTGGCGCTCGACATGTCATGGAACATGGCGTTCGTGGTCGTCTCGGCAGTGATGCTGGCGTGCACTATGGATGAGCGACCGAACACGCCGATCCGGGTGTGGATCATCGGGTACTCGCTGCAGTGTCTGGTGCACGTGGTGCTCGTGTGGCTCGAGTACCGGCGCCGGAGCCAGAGAGACTCGCGGCGTGGACAGAGGGCGCATGACGTGGAGAGCGACGCCGGTAGCGTCGATGATGGCAATGACAGCGATGACGGAGATGGGAGCTCTGGCGACTCGTCTCGCTCTGGATTCACAAAGCGATGTGAATCATTAAATACTGGTGTTTCATTCCTTTGGTGGATAGTGGGCTTTTACTGGGTTGTCTCTGGGGGAGATATACTTATGCAAAATGCACCACGATTGTACTGGTTGTCTGTTGTCTTTCTGGCATTTGATGTCTTTTTTGCCATCTTTTGTGTTGTCTTGGCGTGCTTGATTGGCATTGCCCTCTGTTGTTGTTTGCCCTGCATCATTGCTATTCTCTATGCTGTTGCAGGACAGGAAGGTGCATCAGAAGCTGATCTTAGTATACTTCCTAAATACAGATTTCGAATATTGAACAACGAGAATAAGCCTAGTGGTGGAGCTGGATCAATGGTTCCCATTGAAACAACCAGTAGTTACTTGGCAAATGAACGACTACTCCTACCTGAGGATGCGGAATGCTGTATATGCCTCTGTTCATATGAGGATGGAGCAGAACTCCATGCTCTTCCCTGCAACCATCATTTCCATTCTTCATGCATAGTGAAATGGCTAAAGATGAATGCAACTTGTCCTCTCTGCAAGTACAATATTCTCAAGGGAAACGAACAAGTGTGA 1065 0.539 MSSQTAATDVPEAHAPLLRARHDVTRTPALALLLGRAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVSAVMLACTMDERPNTPIRVWIIGYSLQCLVHVVLVWLEYRRRSQRDSRRGQRAHDVESDAGSVDDGNDSDDGDGSSGDSSRSGFTKRCESLNTGVSFLWWIVGFYWVVSGGDILMQNAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFRILNNENKPSGGAGSMVPIETTSSYLANERLLLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0183 354 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 354 - -
Apr7g0183 354 MobiDBLite consensus disorder prediction 129 165 - -
Apr7g0183 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 349 IPR013083 -
Apr7g0183 354 PANTHER TARGET OF ERK KINASE MPK-1 8 354 - -
Apr7g0183 354 SMART ring_2 303 343 IPR001841 -
Apr7g0183 354 SUPERFAMILY RING/U-box 291 348 - -
Apr7g0183 354 Pfam Ring finger domain 302 344 IPR001841 -
Apr7g0183 354 CDD RING-H2_PA-TM-RING 302 344 - -
Apr7g0183 354 ProSiteProfiles Zinc finger RING-type profile. 303 344 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0183 Apr-Chr7 5895026 5907362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0183 12 353 C3H Transcription Factor Family AT1G68070 68.895 4.24e-176 491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0183 7 5895026 5907362 Apr7g0183 7 5895026 5907362 ECH