Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0181 ATGTCTGCGTTCAGCGCTCTCAGATCGTCGAAACTCGTCTCATGGAAACCCGTTCAGACTCTCTCTCATTCTTTTTTTTATCAACTATCCACTCTGTGGTTCCGTAGAAAATTCAACTCCTTTAAACGTACGTTGGGTTACACTTACACTAAGCTCTTTGAATTTGATGTGTTTGTGCAGACCGGGAGGCTTCAGCAAACCCTAGCGGGTTGCGTGGAGCGGAGCGGCGTGGCTTTGCATTCGGGAAATGTTTCGACGGTAAGACTGTGCCCTGCACGCGCTGGCCGAGGCAGGTTCTTCGATTTTTGCTCCAATGACTTTCCCGCCTCTGTTGATTTCGCAGAGGTTTCGCCTCTCTGCACCACTCTGTGCAAAGGCGGCTTCCGAATTCGAACCGTGGAGCACTTGCTCTCTGCGTTGGAGGCCACTGGTGTCGATAATTGCCGAATCGAGCTGCACAATTTGGATGCTCAAAGTCAAGGGCATGAAGCCGAGATTCCTATATTTGATGGATCAGCAAGGGAATGGGTGGCAGCAGTAGAAGAAGTTGGTTTAAAGGTGGCAGCTGATCTTTATGGGAATAGTGTTGAGAAAATGGCACCACATGTGAATGAACCAGTGTATGTTTCAAGAAATGATTCTTTTGTTGCTGCATTTCCTGCAGATGGGGTTCAGATAACTTATGGCATCAACTTTCCACAGGCACCTGCTATTGGCTGCCAGTGGTTTTCTACAGCCCCTTTGGATAATTTGGCTTATTCCATGCAGATAGCTTTGTCCAGAACCTTCTGCATTTATGAAGAGGTTGAGCAAATGCGCAATGCTGGACTTATCCGAGGAGGTTCTTTAGAAAATGCCATTGTGTGCAGTGCCAGTAAAGGTTGGTTGAATCCACCTCTGCATTTCAGTGATGAACCATGTCGTCACAAGATCTTGGACCTTATTGGTGATCTCTCGCTGTTTGCTCAGTTTGGGAATCAAGGACTCCCCGTGGCACACATTGTAGCTTATAAGGCTGGTCATGCATTGCATGCTGATTTGGCACGTCGCCTAATGGGAATGATTTGA 1068 0.4747 MSAFSALRSSKLVSWKPVQTLSHSFFYQLSTLWFRRKFNSFKRTLGYTYTKLFEFDVFVQTGRLQQTLAGCVERSGVALHSGNVSTVRLCPARAGRGRFFDFCSNDFPASVDFAEVSPLCTTLCKGGFRIRTVEHLLSALEATGVDNCRIELHNLDAQSQGHEAEIPIFDGSAREWVAAVEEVGLKVAADLYGNSVEKMAPHVNEPVYVSRNDSFVAAFPADGVQITYGINFPQAPAIGCQWFSTAPLDNLAYSMQIALSRTFCIYEEVEQMRNAGLIRGGSLENAIVCSASKGWLNPPLHFSDEPCRHKILDLIGDLSLFAQFGNQGLPVAHIVAYKAGHALHADLARRLMGMI* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0181 355 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 2 353 IPR004463 GO:0008759|GO:0009245
Apr7g0181 355 SUPERFAMILY Ribosomal protein S5 domain 2-like 205 352 IPR020568 -
Apr7g0181 355 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 65 352 IPR004463 GO:0008759|GO:0009245
Apr7g0181 355 SUPERFAMILY Ribosomal protein S5 domain 2-like 64 186 IPR020568 -
Apr7g0181 355 Gene3D lpxc deacetylase, domain 2 202 354 IPR011334 GO:0008759|GO:0009245
Apr7g0181 355 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 65 351 IPR004463 GO:0008759|GO:0009245
Apr7g0181 355 Gene3D lpxc deacetylase, domain 1 63 190 IPR015870 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0181 61 351 Carbohydrate Esterase AT1G25054 66.667 4.07e-140 399
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0181 7 5855475 5866218 Apr7g0181 7 5855475 5866218 ECH