Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0179 ATGGCCGACGCTCTCTCGGTGATTCCGCCAGCCGTGCTTCGGAACCTCGCCGACAAGCTCTATGAGAAGCGCAAGAATGCTGCTCTTGAGGTTGAGGGGATAGTGAAGCAGCTTGCTGGTGCTGGGGATCATGATAGGATAACTGCTGTGATCAAATTGTTGACTGTGGAATTTACTTATTCGCCACAAGCGAATCACCGCAAGGGAGGGTTGATAAGCTTAGCTGCTGCTACTGTTGGGTTGACTACTGACGCTGCCCAGCATCTTGAGCTAATTGTACCCCCTGTGTTAAATTCTTTCTCCGATCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCATTATATAACATAGCAAAGGTTGTGCGAGGAGATTTTATTATATTCTTCAACCAGATCTTTGATGCCTTGTGCAAGCTTTCTGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCATCTCTTAGATCGACTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAGTTTATACCGTTGTTGCGGGAGCGCATGAATGTATTGAATCCATATGTCCGTCAGTTTTTGGTAGGATGGATTACTGTACTGGACAGTGTCCCAGATATTGACATGCTGGGATTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAGAATTCACCGTCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAAAGGGCTGGTTCTCCAGATGAATTTACAAGGTTAACAGCTATCACTTGGATAAATGAGTTTGTCAAACTGGGTGGAGATCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTACCCTGCATATCTGATAAAGAAGAGAAAATTAGAGTGGTTGCTCGTGAAACCAACGAAGAGCTGCGTGCAATCAAGGCTGATCCAGCTGAAGCGTTTGATGTAGGAGCAATCCTCTCCATTGCTAGGAGGCAACTATCTAGTGAGTGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTCTATACAGACATCGTAATGAGGTTTTGACTTTTCTGAATGACATATTTGATACCCTACTCAAAGCACTTTCAGATCCATCTGATGAGGTCGTGCTTCTTGTTCTTGATGTTCATGCATGCATTGCAAGAGATCCCCACCATTTCCGGCAGCTTGTTGTTTTTCTAGTGCACAATTTCCGGCTAGATAATTCTCTTTTGGAGAAGCGTGGTGCTTTGATTATCCGACGCCTTTGTGTGCTTTTGAATGCTGAGAAAGTCTACCTTGAACTTTCTACAATATTAGAAGGAGAATCTGATCTGGATTTTGCATCGATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAATTATCTGAGATTCGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCTGGGAAGGACTTGTATGTTTCTCTGTACGCTTCTTGGTGCCATTCTCCAATGGCAATTATAAGCCTTTGTTTTTTAGCTCGGACTTACCAACATGCCAGTGCCGTGATTCAATCACTAGTAGAGGAGGATATTAATGTCAAGTTTTTGGTCCAACTGGATAAATTGATTCGCTTGCTGGAAACTCCTATCTTTGCATATCTTCGATTGCAGCTTCTTGAACCTGGAAGATATATTTGGTTATTCAAGGCATTATATGGTCTTTTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTTAAGATACTAAAAACTCGTTTGAAAGCTGTACCACCATATTCGTTCAATGGTGAGCAATTGAAGAGAATGACTTCAGGAGATCTCTACCAGTTTCATCACATGCCTGATGGATTTCAAACCATTGAGGATGGTGACAAAACTGAAGATGGTGGAAACTCACATAATGGAATAAATTTTGCTGCAAGGCTGCGACAGTTTCAGCAAATGCAGCACCAGCATCGAGCTCATGCTAAAACAGAGACAAATTTGCGCAATATTTCCTCTTCATTGTCGAAGGAGGTACAAGGAGAGGAAGAACCTAGAAGACCTAAATCTATTGATCTTAATGTTCCTCCTTCAAGATCGTCAAAGAGAGGTCCAGGGAAGCTACAGTTATAA 2172 0.419 MADALSVIPPAVLRNLADKLYEKRKNAALEVEGIVKQLAGAGDHDRITAVIKLLTVEFTYSPQANHRKGGLISLAAATVGLTTDAAQHLELIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIKADPAEAFDVGAILSIARRQLSSEWEATRIEALHWISTLLYRHRNEVLTFLNDIFDTLLKALSDPSDEVVLLVLDVHACIARDPHHFRQLVVFLVHNFRLDNSLLEKRGALIIRRLCVLLNAEKVYLELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLARTYQHASAVIQSLVEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPPYSFNGEQLKRMTSGDLYQFHHMPDGFQTIEDGDKTEDGGNSHNGINFAARLRQFQQMQHQHRAHAKTETNLRNISSSLSKEVQGEEEPRRPKSIDLNVPPSRSSKRGPGKLQL* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0179 723 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Apr7g0179 723 PANTHER TAX1 BINDING PROTEIN-RELATED 4 692 IPR026825 GO:0006661|GO:0070772
Apr7g0179 723 SUPERFAMILY ARM repeat 4 542 IPR016024 -
Apr7g0179 723 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Apr7g0179 723 Gene3D - 247 420 IPR011989 -
Apr7g0179 723 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Apr7g0179 723 Gene3D - 1 246 IPR011989 -
Apr7g0179 723 MobiDBLite consensus disorder prediction 667 723 - -
Apr7g0179 723 PANTHER PROTEIN VAC14 HOMOLOG 4 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0179 Apr-Chr7 5778389 5795091 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0179 7 5778389 5795091 Apr7g0179 7 5778389 5795091 ECH