Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0177 ATGGACTCAAAGGCTATGTGCTTCATAACCCACCAAGCCATTTTCAACGCTGTTCGATCTGGGGACCTTGAAGGGCTGAAGCAGCAGCTGAAGAACAAGGGTGAATCATCTTCAGAAGGGTCATCATCCCCGTCATCATTATCATCACTTTCTGAGCTCATGTGCATGCAGAGCGATGCAGGGGAAACTATGTTGTACATAGCTGCAGAGCATGGTCTTAATGAGGTGTTCAGCTTCTTGCTCAGTTTCTGTGACTTTGAGGTCATGAAAATCAGGTCCAAATCTGATATGAACCCCTTTCATGTTGCAGCCAAGCGTGGCCACTTGGATATTGTGAGGGAGATTTTGAGCACTTGGCCTGAAGTTTGCAAGTTATGTGATTCCTCCAACACTAGCCCCCTCTATTCAGCTGCTGTTCAAGATCATTTGGATGTAGTGAATGCAATATTGGATGTTGATGTGAGTTCAATGATGATAGTGAGGAAAAATGGTAAAACTGCGTTGCACAATGCTGCTAGGTATGGCATCCTTCGCATCGTGAAAGCACTTATTGCGCGGGATCCAGGAATAGTCTGCACCAAAGACAAAAAGGGCCAAACAGCACTGCATATGGCTGTGAAAGGACAGAGTACTTCAGTGGTGGAGGAAATATTACAAGCAGACCTGACAATATTGAACGAAAGAGATAAGAAGGGTAACACAGCTCTTCACATGGCTACCAGGAAAGCCCGTTCACAGATAGTGAGCCTTTTGTTAACCTACACAGCTATGAATGTCAATGCCATCAATAATCAAAAGGAAACTGCCTTGGATTTGGCAGATAAACTTCCATATGGAGATTCAGCTTTGGAAATCAACGAGGCCCTTACAGAATGTGGAGCCAAGCATGCCAGGCACATTGGCAAGGTGGATGAAGCCATGGAACTCAAAAGAGCTGTGAGTGATATAAAGCATGAGGTGCAGTCACAGCTCATACAGAATGAAAAAACTCGCAAACGAGTTTCTGGCATTGCTAAGGAGTTGAAGAAAATTCATAGAGAGGCAGTTCAAAACACCATCAATTCTGTTACAGTAGTAGCTGTCCTTTTTGGCTCAATAGCATTTGTGGCTTTATTCAGTTTGCCTGGTCAATATAGAAAGAAGCAACCAGAGGCAGGGAAGGCAAACATAGCTGACGATGTTTCATTCAGTGTTTTCTGCCTTTTGAATGCCACAGCTCTTTTCATTTCTCTTGCAGTTGTGGTTGTTCAGATCACTTTGGTGGCTTGGGATACAAGGGCTCAAAAGCAGGTTGTGTCAGTTATGAACAAGCTAATGTGGGCAGCATGTGCCTGCACTTGTGGAGCTTTTCTTGCAATAGCTTTTGTGGTTGTTGGAGATGAAACATGGTTGGCTATTAGTGTCACCCTCTTCGGAGCACCAATTTTAGTTGGGACTCTAGCATACTTGTGCTACTTTGTTTTCCGCCAACATTTTGGATCTTTTAGTGATTCCCAGAGATTAGTGAAGAGAGCAAGTGGAAGCAAATCATTTTCATGGTCTTACTCAGTAAATATATCAGATGTGGATGATTATAATTCTGATCTTGAGAAGATATATGCTTTATAA 1608 0.4316 MDSKAMCFITHQAIFNAVRSGDLEGLKQQLKNKGESSSEGSSSPSSLSSLSELMCMQSDAGETMLYIAAEHGLNEVFSFLLSFCDFEVMKIRSKSDMNPFHVAAKRGHLDIVREILSTWPEVCKLCDSSNTSPLYSAAVQDHLDVVNAILDVDVSSMMIVRKNGKTALHNAARYGILRIVKALIARDPGIVCTKDKKGQTALHMAVKGQSTSVVEEILQADLTILNERDKKGNTALHMATRKARSQIVSLLLTYTAMNVNAINNQKETALDLADKLPYGDSALEINEALTECGAKHARHIGKVDEAMELKRAVSDIKHEVQSQLIQNEKTRKRVSGIAKELKKIHREAVQNTINSVTVVAVLFGSIAFVALFSLPGQYRKKQPEAGKANIADDVSFSVFCLLNATALFISLAVVVVQITLVAWDTRAQKQVVSVMNKLMWAACACTCGAFLAIAFVVVGDETWLAISVTLFGAPILVGTLAYLCYFVFRQHFGSFSDSQRLVKRASGSKSFSWSYSVNISDVDDYNSDLEKIYAL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0177 535 Gene3D - 9 314 IPR036770 -
Apr7g0177 535 Pfam Domain of unknown function 347 456 IPR026961 -
Apr7g0177 535 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 2 535 - -
Apr7g0177 535 MobiDBLite consensus disorder prediction 30 48 - -
Apr7g0177 535 Pfam Ankyrin repeats (3 copies) 161 223 IPR002110 GO:0005515
Apr7g0177 535 Pfam Ankyrin repeats (3 copies) 65 151 IPR002110 GO:0005515
Apr7g0177 535 Pfam Ankyrin repeat 232 264 IPR002110 GO:0005515
Apr7g0177 535 ProSiteProfiles Ankyrin repeat region circular profile. 163 184 - -
Apr7g0177 535 ProSiteProfiles Ankyrin repeat region circular profile. 231 256 - -
Apr7g0177 535 SUPERFAMILY Ankyrin repeat 13 277 IPR036770 -
Apr7g0177 535 ProSiteProfiles Ankyrin repeat profile. 231 264 IPR002110 GO:0005515
Apr7g0177 535 SMART ANK_2a 231 261 IPR002110 GO:0005515
Apr7g0177 535 SMART ANK_2a 95 124 IPR002110 GO:0005515
Apr7g0177 535 SMART ANK_2a 197 226 IPR002110 GO:0005515
Apr7g0177 535 SMART ANK_2a 129 159 IPR002110 GO:0005515
Apr7g0177 535 SMART ANK_2a 163 192 IPR002110 GO:0005515
Apr7g0177 535 SMART ANK_2a 60 88 IPR002110 GO:0005515
Apr7g0177 535 ProSiteProfiles Ankyrin repeat profile. 163 184 IPR002110 GO:0005515
Apr7g0177 535 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 2 535 - -
Apr7g0177 535 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0177 Apr-Chr7 5765996 5770691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0177 1 535 Miscellaneous Gene Families AT2G01680 69.030 0.0 744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0177 7 5765996 5770691 Apr7g0177 7 5765996 5770691 ECH