Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0173 ATGTCATCAGCAACAAAAGCTTCCTCGCCATCGCCAGCGGCTTCCGTCGTCTCTGCCGCCGCGCCCTACGACCGCGCTAAAGCCGTGAAAGAGTTCGACGAATCTAAGGTTGGAGTGAAGGGTTTGATGGACTCGGGAATCCAAACCATTCCCCCTTTCTTCGTTCACCCACCCGAAACCCTATTGGACCTCAAATCGAAACCGGAAGCCGAATCCGCGCCCGAAATCCCCACGGTCGACCTCTCCGCCTTGCAGGGCTCACGCGCCGCCGTCGTGGAAAAAATCCGGCGGGCCGCCAGCACGGTGGGGTTCTTCCAGGTGGTGAACCACGGCATCCCCGACGACCTTTTCCGGCGAACCCTCGCGGCGGTGAAGGCGTTTCACGAGCAGCCGCCGGAGGAGAGGTCGCGGGTGTACCGTAGGGAAATGGGACATGGCGTATCCTATATTTCCAACGTGGATCTCTTCCAATCAAAAGCTGCCAGCTGGCGCGACACTATTCAGATTAGGATGGGGCCGACCGCAGCGGATTGGAACGAGATTCCGGAGGTGTGTAGAGAAGAGGTGACGCAGTGGGACAAGGAAGTGGTGCGCGTGGCTGCGGTGTTGTATGAGTTGCTCAGCGAAGGGTTGGGATTGGGTGCGGAGAGGCTCACCGAGATGGGTTTGGTTGAAGGGAGAGTGATGGTGGGACATTATTACCCGTTTTGCCCTCAGCCTGATCTTACTGTGGGCCTTAATTCTCACGCGGATCCAGGGGCATTGACGGTATTACTGCAGGACCATATTGGAGGCTTGCAGGTTCAGACCAAACAAGGTTGGATCCATGTCAAGCCTCACCCTCAAGCTTTGGTCATCAACATTGGAGATTTGCTTCAGATAATTTCTAATGAGGAATATAAGAGTGCTCATCATCGGGTGTTAGCCAACTATTCTAATGAGCCACGAGTCTCAGTTGCTTTTTTCCTGAACCCTAGTGAAAGAGAGAGGGTTTTTGGACCTTTGCCAGAGCTAACATCAGAAGAGAAACCAGCCCTTTATAGGAGTTTCACGTTCAATGAATTTATGACCAGATTCTTCAAGAAAGAATTGGATGGTAAATCCTTGACAAATTTCTTCAGGCAGTGA 1128 0.531 MSSATKASSPSPAASVVSAAAPYDRAKAVKEFDESKVGVKGLMDSGIQTIPPFFVHPPETLLDLKSKPEAESAPEIPTVDLSALQGSRAAVVEKIRRAASTVGFFQVVNHGIPDDLFRRTLAAVKAFHEQPPEERSRVYRREMGHGVSYISNVDLFQSKAASWRDTIQIRMGPTAADWNEIPEVCREEVTQWDKEVVRVAAVLYELLSEGLGLGAERLTEMGLVEGRVMVGHYYPFCPQPDLTVGLNSHADPGALTVLLQDHIGGLQVQTKQGWIHVKPHPQALVINIGDLLQIISNEEYKSAHHRVLANYSNEPRVSVAFFLNPSERERVFGPLPELTSEEKPALYRSFTFNEFMTRFFKKELDGKSLTNFFRQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0173 375 Gene3D - 29 357 IPR027443 -
Apr7g0173 375 SUPERFAMILY Clavaminate synthase-like 36 367 - -
Apr7g0173 375 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 225 325 IPR005123 -
Apr7g0173 375 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 19 363 - -
Apr7g0173 375 Pfam 2OG-Fe(II) oxygenase superfamily 228 325 IPR044861 -
Apr7g0173 375 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE HOMOLOG 4-LIKE 19 363 - -
Apr7g0173 375 Pfam non-haem dioxygenase in morphine synthesis N-terminal 76 173 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0173 Apr-Chr7 5645538 5649131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0173 23 372 Glycosyltransferase AT5G59530 44.847 2.05e-100 300
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0173 7 5645538 5649131 Apr7g0173 7 5645538 5649131 ECH