Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0171 ATGGGTTCCGAAGGATCCAGCGTCGTCGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAAAGAGGTGAGAAGGGAATTGGAGATGGAACTGTTAGCTATGGAATGGATGATGCTGATGATATATACATGCAGTCTTGGACTGGGACTATCATTGGTCCACCTGGTACTGTTCATGAAGGACGTATATACCAGTTGAAATTATTTTGTGGCAAGGACTATCCAGACAATCCTCCATCTGTTAGATTTCAAACAAGGATTAACATGACATGTGTCAATCAAGAAACTGGAGTTGAGCCACATCTGTTCCCGATGCTGGCTAATTGGAAACGCGAGTGTACAATGGAAGACATTTTGATGCAATTGAAGAAAGAAATGATGTCTCCACAAAATCGGAAGCTAACTCAGCCTCCTGAAGGCAATGAAGAAGCCAGGATTGACCAAAAGGGGCTGGTGGTGAAATGTTGTATTATGTAA 477 0.4235 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGVEPHLFPMLANWKRECTMEDILMQLKKEMMSPQNRKLTQPPEGNEEARIDQKGLVVKCCIM* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0171 158 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 143 - -
Apr7g0171 158 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 143 - -
Apr7g0171 158 Gene3D Ubiquitin Conjugating Enzyme 2 143 IPR016135 -
Apr7g0171 158 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 158 IPR000608 -
Apr7g0171 158 SUPERFAMILY UBC-like 9 141 IPR016135 -
Apr7g0171 158 SMART ubc_7 14 157 - -
Apr7g0171 158 Pfam Ubiquitin-conjugating enzyme 41 133 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0171 Apr-Chr7 5582612 5594995 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0171 7 5582612 5594995 Apr7g0171 7 5582612 5594995 ECH