Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0163 ATGGAGAGAGATTTCATGGGTTTGAACATAAAAGAATCATTGTCTGTGTTGAAGGAGGAGATGAACAATGGTTTTACGAACGGTGCAGCAGTAAAATGGCCCTTCTTGGACAAAGTCTCTGTTCATCCTCATTTGATGATGTCTTTCAGCGCTTCTCAAGATGACAAGGCTAAAATGAAGGTGTCTGATTCCGTCAAATCTTCTGGATTCTTTGCGATCCCAAGTCTTGATGCATTTGACTCTATTAAAAAACGCACTGCAGCTGAACCACAGAAATCTTTCAATCATGATGGAAAAGGTGGCATTCATTTTTCCCTGACTCAACATGATGTGAATACTGTGAATCGCCCTCATGATATGAAGATGTTTTCGGTTTCCATGGGACATCCATTGCTAAAGAATCATTTTTCAACTGTTGGTCAGAATATGAATGATGCTAATGTGAAACAACCACTGCTTGGGGGAATACCTGTTACAGTTCCCCATTCAGCTATTCCCATTGTTGGTGCTGTTGCTGGAATGACTGAATCGTGCACGAAACCGTCTACACCTGCTCCTCAACTTACCATCTTCTATGCTGGCACTGTGAATGTCTTTGATGATATCTCACCTGAAAAGGCACAAGCTATCATGTTGTTGGCTGGGAATGAATTTTCTGCAGCTTCTAACATGGCACAGCCCAAAGTTCAGGTTCCCGGCTTAAAGTTGGCAGCAGGCGACGGTGTTCCTGCGAGTCAATCCATAAACGTACCACCCTGCTCTGGTCTTTCAAGTCCTTTATCTGTTTCTTCACATACTGGTGCTCAATTAGGGAGTGGTTCTAGTAGCAACGATGAATTTCTGGCAGCTAAATCATCTGGAGCTCCCACCACTTCTATTAGCAAAGTGGAGACTCCAAAAGTGGTCAATGCAACCGCCATGTTACCATCAGCTGTGCCACAGGCTCGCAAGGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAATGCAGCACCATATAACCTCAACAAGATGTCTGAGAATGTGCCACAGCGGGATTCAATGGTTTGTAACATCAATGCAAGTGCTGGTACTGATGCACTGTCAACCAAGCAAGGATAG 1113 0.4412 MERDFMGLNIKESLSVLKEEMNNGFTNGAAVKWPFLDKVSVHPHLMMSFSASQDDKAKMKVSDSVKSSGFFAIPSLDAFDSIKKRTAAEPQKSFNHDGKGGIHFSLTQHDVNTVNRPHDMKMFSVSMGHPLLKNHFSTVGQNMNDANVKQPLLGGIPVTVPHSAIPIVGAVAGMTESCTKPSTPAPQLTIFYAGTVNVFDDISPEKAQAIMLLAGNEFSAASNMAQPKVQVPGLKLAAGDGVPASQSINVPPCSGLSSPLSVSSHTGAQLGSGSSSNDEFLAAKSSGAPTTSISKVETPKVVNATAMLPSAVPQARKASLARFLEKRKERVMNAAPYNLNKMSENVPQRDSMVCNINASAGTDALSTKQG* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0163 370 MobiDBLite consensus disorder prediction 255 292 - -
Apr7g0163 370 Pfam Jas motif 313 337 IPR018467 -
Apr7g0163 370 PANTHER PROTEIN TIFY 7 17 361 - -
Apr7g0163 370 Pfam tify domain 185 215 IPR010399 -
Apr7g0163 370 ProSiteProfiles Tify domain profile. 181 216 IPR010399 -
Apr7g0163 370 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 361 IPR040390 -
Apr7g0163 370 SMART tify_2 181 216 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0163 Apr-Chr7 5296739 5300424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0163 31 354 Tify Gene Family AT3G17860 35.224 8.17e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Apr7g0163 tify 4.5e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0163 7 5296739 5300424 Apr7g0163 7 5296739 5300424 ECH