Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0079 ATGGTGTCAAAGTCCTATTCAAACCTGTTAGAGTTGGCCTCGGGTGAGGCTCCATCATTCGGGTTCATGAACAGGAGAATTCCAAGGATTATGACTGTGGCAGGGTTGATATCTGATGTTGATGATGACCCAGTGGAGAGTGTGTGCTCCGATCCCTCTTCATCGTCTGTGCACCGCGACCGGATCATAATGGTGGCTAATCAGCTCCCACTAAGGGCTCAGAGGAAGGCAGATGGGAATAGGAATTGCTGGTCTTTTGAATGGGATGAGAATTCTCTTCTTCAATTGAAAGATGGGTTAGGTGATGATGATATTGAGGTTATTTATGTAGGTTGTCTCAAGGAGGATGTGCACCCAAATGAACAGGATGAGGTTTCACAGATACTTCTTGACACCTACAAGTGTGTCCCAACTTTTCTCCCACCTGATCAGTTTACTCGGTACTATCATGGTTTTTGCAAACAACAGTTGTGGCCACTGTTTCATTACATGCTGCCTTTATCACCAGAACTTGGTGGCAGGTTCAATAGGTCACTGTGGCAAGCTTATGTGTCTGTCAATAAAATATTTGCAGACAGGATTATGGAAGTTATCAACCCTGAAGATGATTATGTGTGGATACATGATTATCATCTGATGGTGTTGCCGACTTTCTTGAGGAAGAGATTCAACAGAGTGAAGCTTGGGTTCTTCCTTCATAGTCCATTTCCTTCATCAGAAATATACAAAACATTGCCTGTTAGGGAAGAGATCTTAAGGGCCCTTCTTAATTCAGATTTGATCGGGTTCCACACTTTTGATTATGCGCGCCATTTCCTTTCCTGTTGTAGTCGGATGCTTGGCCTTACATATGAATCCAAGCGTGGTTATATTGGGATCGAGTATTATGGTAGGACTGTTAGTATCAAAATTCTTCCTGTTGGAATTCACATGGGTCAGCTTCAATCGGTTTTAAGGCTGCCACAGACTGAAGAAAAAGTTTGCGAGCTCATTAGACAGTTTTCTGATCAGGGAAGGACAATGTTGCTTGGGGTGGATGACATGGATATTTTTAAGGGAATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTCCTTCAGCACCCTGAGTATCAAGGAAATGTAGTGCTGGTCCAGATAGCTAATCCTGCTAGGGGACGAGGGAAAGATGTGAAAGAAGTTCAAGCTGAGACCAAAGCCACAGTAAAACGAATCAATGAAACATTTGGGAAACCTGGGTATGATCCTGTCATTCTGATTGAGGACCCTCTCAAATTCTATGAGAGAGTTGCTTACTATGTTGTTGCTGAGTGTTGTTTAGTCACTGCTGTACGGGATGGAATGAATCTCATTCCCTATGAATATATCATCAGTCGTCAAGGAAATGAAACATTGGATAAAGTCTTGGGTCTTGCTTCCTCCCCCAAGAAAAAAAGCATGTTAGTAGTGTCTGAGTTCATTGGCTGTTCCCCCTCTCTAAGTGGAGCAATCAGAGTGAACCCGTGGAATATTGATGCAGTAGCTGAAGCAATGGACTCTGCGCTGGAAATGGCCGATTCGGAGAAACAGCTTAGGCATGAAAAGCATTATAGATATGTTAGTACTCATGATATTGGGTACTGGGCTCGGAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGTGATCATGTGCGACGAAGGTGGTGGGGAATTGGTTTTGGATTAAGCTTTAGAGTTGTTGCACTTGATCCAAACTTCAAGAAGCTCTCAATGGAGCACATTGTTTCTGCTTACAAGCGGACAACAACTAGGGCAATCCTTCTAGACTATGATGGTACGCTAATTCCTCAGGCATCCATTGATAAGAGCCCAAGCAGTAAATCCATTGAAATTCTTAATAGTTTGTGTAGAGATAAGAACAACATGGTGTTTCTTGTTAGTGCTAGGAGCCGAAAGACACTTTCTGAATGGTTTTCTCCTTGTGAGAATCTTGGAATTGCAGCTGAGCATGGTTACTTTCTAAGAATGAAGCGAGATACAGAGTGGGAAACACATGTTGCTGCAGCAGACTGTAGTTGGAAACAAATTGCAGAACCCGTTATGAAACTTTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACTTCACTTGTTTGGTGCTATGAAGATGCAGATCCTGATTTTGGATCATGCCAAGCTAAGGAGCTTCTTGACCATCTTGAGAGTGTGCTTGCAAATGAACCAGTGACAGTCAAGAGTGGCCAGAATAATGTAGAGGTTAAACCACAGGAGATGACAGGTCTGACGAAGACATGTTCGAGGTTATCACGAGTTCGACGGGTGGTCCAATTGCACCAAGAGCCGAGGTATTTGCATGCACCATTTGTCGGAAACCCAAGTAAACATCATTTTAGATGGTCAAACAGGACAAAAATGGTTAAGAGTCCAAAGTTATTACTCATCACCATGGCATTGTGCTAA 2469 0.4297 MVSKSYSNLLELASGEAPSFGFMNRRIPRIMTVAGLISDVDDDPVESVCSDPSSSSVHRDRIIMVANQLPLRAQRKADGNRNCWSFEWDENSLLQLKDGLGDDDIEVIYVGCLKEDVHPNEQDEVSQILLDTYKCVPTFLPPDQFTRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPVREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLRLPQTEEKVCELIRQFSDQGRTMLLGVDDMDIFKGISLKLLAMEQLLLQHPEYQGNVVLVQIANPARGRGKDVKEVQAETKATVKRINETFGKPGYDPVILIEDPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNETLDKVLGLASSPKKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALEMADSEKQLRHEKHYRYVSTHDIGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLIPQASIDKSPSSKSIEILNSLCRDKNNMVFLVSARSRKTLSEWFSPCENLGIAAEHGYFLRMKRDTEWETHVAAADCSWKQIAEPVMKLYTETTDGSTIEDKETSLVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNNVEVKPQEMTGLTKTCSRLSRVRRVVQLHQEPRYLHAPFVGNPSKHHFRWSNRTKMVKSPKLLLITMALC* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0079 822 Pfam Trehalose-phosphatase 600 761 IPR003337 GO:0003824|GO:0005992
Apr7g0079 822 TIGRFAM T6PP: trehalose-phosphatase 596 761 IPR003337 GO:0003824|GO:0005992
Apr7g0079 822 Gene3D Glycogen Phosphorylase B; 316 534 - -
Apr7g0079 822 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 762 - -
Apr7g0079 822 Gene3D - 599 761 IPR023214 -
Apr7g0079 822 CDD GT20_TPS 61 550 IPR001830 GO:0003824|GO:0005992
Apr7g0079 822 Gene3D Glycogen Phosphorylase B; 53 315 - -
Apr7g0079 822 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 553 - -
Apr7g0079 822 Pfam Glycosyltransferase family 20 61 550 IPR001830 GO:0003824|GO:0005992
Apr7g0079 822 Gene3D - 680 759 - -
Apr7g0079 822 SUPERFAMILY HAD-like 597 760 IPR036412 -
Apr7g0079 822 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 762 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0079 Apr-Chr7 3176592 3181003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0079 1 783 Trehalose Biosynthesis Gene Families AT1G68020 79.648 0.0 1318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0079 7 3176592 3181003 Apr7g0079 7 3176592 3181003 ECH