Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0077 ATGACAACCCGATCGAGAAAATTGAAGCGTAAACTCCATCCTGAACCACCTTCGCGCACCATTAACAAGAAGCTTCGGTCGAAGCTTCCTCGCCGGCGTAGGCACCAGATCTCGCCGGTGCTTCTCGTCGGCATTTCAGGCGACAATCCTCGTTTCTCCATCGATTCGAGCTCCGGCTCTGACTTTGCAGCCTGTGAAGTTTCATGCAATTCCAGCATAGCTTCCGCTGTGTTCACCGGCAAGGGAAAGACAAACTCAAGGAACAGAACCTCAAGCGATTCCTCGAGGAATCGGAGATTCGAGGAGGTGTCAGAGTCGTCGTGCGTGGATTCCAATTCTAGAGTTCACGAACGAAGCAGAAGCTTGGTATTGAAGTTCAGGAGCAGTAAAGAAAGTAAGAATGCGAAAGAAAACGACGACGTTTCGGAAGCTTGCGCTAAATCAGAGATTACTTGGGAGGAGCAATTTAATTCTAAGTCCGGTAACGGAAATTTCAAAATGTCTTCCGATTTAAATCTAAACGACGTCGTCTCATTGAGTTGCGGTGTTCGTGCGGCGTCATTTGAGGGGGAAAAGAACAGAGGCAAGGTAAACAGAGCATCGGAATCGGAATACTCTCAGGATAATTGCGTGGATTTAATAGCGCAATCAATGATAAAGCAGGATTCAAATAACTACGACGCCGTTTCGGATCTCGCTTGCTCTGAGCAATTGCGATTTTCGTACTGCGACGACCAATCGGAGTACTGCTCCAGCCAGGGAACTGTGTTCTCTGACCTTCACTCTGATATTTTCCCAGAATGTTCACAGCTAGAGCTTTCAGATTACACTCCATCTCTGTTCATGGACTCTGGAAGCCAATTTTCTGAGGGCTCCGTTGGAGAAACTCCTTCACCGACGTACTCGCTGTTCCTCAAGTACCGGCAGGAATTCTTGACTCTCGCTTCACCAGTTATTATTGCTTCTCCAAACATCCTCAATGAGGCTTCTCTTCGATTTGCGAGGTTCCAAGATTCGGATGACGAAGAGAGCTACCAGATGCTGAGAAAGAGAGAAAGAAGACATGTCTTCCTGTGGAATTACGGTGAAAGATATTTCTCTACCACCGAATTCGGAGAGATCGTGCTTCAGCAACGCGAGCAAATGGTTCACTGGATGGTTGAGCAATCTTATCGAAAACAGCTTCGACAAGAGACAATGTTTCTTGGAGTCAACCTACTTGACCGTTTCCTAAGCGAAGGATACTTCAAAGCTAAAAGAAACCTTCAAATTGGTGGAATAGCCTGCCTCACGTTAGCGACCAGGATCGAAGAAAACCAGCAATATAACAGAGTGGGGCAAAAATATTTCTACGTAGGAAGCAGTGTATACAGTAGAATGGAGGTGGTAGCTATGGAATGGATGGTGCAGGACGTGCTCAAGTTTCAGTGCTTTCTGCCTACCATCTACAATTTCCTGTGGTTTTACTTAAAAGCAGCTAATGCTGATGGAATCATAGAGAAGAGGGTCAAGTATCTTGCAGTGCTGGCACTGTCAGCTCATGAGCGGCTGTGCTACTGGCCCTCAACAGTTGCTGCAGCACTTGTAATCCTTGCTTGTCTTGAAGTCAATCAAAATGCATCCCACAAAGTGATAGGGATCCACGTTAGATCGAAAGATGAGAATTTGCATGAATGCATAGAGAGCCTGGAGTGGTTGTTGCGCTATCTATGA 1713 0.4641 MTTRSRKLKRKLHPEPPSRTINKKLRSKLPRRRRHQISPVLLVGISGDNPRFSIDSSSGSDFAACEVSCNSSIASAVFTGKGKTNSRNRTSSDSSRNRRFEEVSESSCVDSNSRVHERSRSLVLKFRSSKESKNAKENDDVSEACAKSEITWEEQFNSKSGNGNFKMSSDLNLNDVVSLSCGVRAASFEGEKNRGKVNRASESEYSQDNCVDLIAQSMIKQDSNNYDAVSDLACSEQLRFSYCDDQSEYCSSQGTVFSDLHSDIFPECSQLELSDYTPSLFMDSGSQFSEGSVGETPSPTYSLFLKYRQEFLTLASPVIIASPNILNEASLRFARFQDSDDEESYQMLRKRERRHVFLWNYGERYFSTTEFGEIVLQQREQMVHWMVEQSYRKQLRQETMFLGVNLLDRFLSEGYFKAKRNLQIGGIACLTLATRIEENQQYNRVGQKYFYVGSSVYSRMEVVAMEWMVQDVLKFQCFLPTIYNFLWFYLKAANADGIIEKRVKYLAVLALSAHERLCYWPSTVAAALVILACLEVNQNASHKVIGIHVRSKDENLHECIESLEWLLRYL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0077 570 ProSitePatterns Cyclins signature. 379 410 IPR006671 -
Apr7g0077 570 PANTHER CYCLIN-SDS 4 561 - -
Apr7g0077 570 PANTHER CYCLINS 4 561 IPR039361 -
Apr7g0077 570 PIRSF Cyclin_A_B_D_E 57 250 IPR039361 -
Apr7g0077 570 PIRSF Cyclin_A_B_D_E 342 568 IPR039361 -
Apr7g0077 570 Pfam Cyclin, C-terminal domain 480 564 IPR004367 -
Apr7g0077 570 MobiDBLite consensus disorder prediction 79 107 - -
Apr7g0077 570 Gene3D - 472 569 - -
Apr7g0077 570 Pfam Cyclin, N-terminal domain 373 476 IPR006671 -
Apr7g0077 570 MobiDBLite consensus disorder prediction 92 107 - -
Apr7g0077 570 SUPERFAMILY Cyclin-like 339 476 IPR036915 -
Apr7g0077 570 MobiDBLite consensus disorder prediction 1 21 - -
Apr7g0077 570 CDD CYCLIN 479 553 IPR013763 -
Apr7g0077 570 SUPERFAMILY Cyclin-like 480 567 IPR036915 -
Apr7g0077 570 CDD CYCLIN 379 469 IPR013763 -
Apr7g0077 570 Gene3D - 367 471 - -
Apr7g0077 570 SMART cyclin_7 384 471 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0077 Apr-Chr7 3100894 3105969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0077 379 539 Core Cell Cycle Gene Families AT5G25380 33.735 2.80e-21 95.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0077 7 3100894 3105969 Apr7g0077 7 3100894 3105969 ECH