Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0073 ATGGCTCTCTGCACCAACACCAACGCCGCCACCACCACCATCTTCTTCTTCTTCTTTCTCTTCAACTTTCAATCCTCTCTTTCCCAGCTAACATCCTTCAACATCTCACACTCCCCATGGCTCCCAACACAGAACTTGACCCTTCTCTCCCCAAACAAAAACTTCACTGCAGGCTTCTTTTCCCAACCCAACTCTCCGAACCTCTTCACCTTCTCAGTTTGGTTCACCAAAGTCCCTAAAAGTGCAAACCCTCTTATATGGACCGCCACACCCCAAGTCAACACTTCTGGCTCCCTTGTAATCACTTCAAAAGGTGAACTTCTCCTCAATGGTTCATCCTTTCCCAATGCTTCCACTGCCACTCAGCTTGTTCTTCAAAATGATGGAAACCTGGTGTTTGGAAACTGGTCCAGCTTCAAGAACCCAACCGACACAGTTTTGCCCAACCAGAACTTCAGTACTATGATTGAGTTGAAATCCAACAATGGGAAATTCAAGTTCATCAATGCTCAGTTTCTGGTCCTCGGTTCCACCTCAGCTCAGTACTACAATACCCCAAGCCGCTTGCTAAGCATGGATGATCAAGGAAAAATGAGCATGGATGGAAGCTCTTTTCTCACCTCTGATTATGGTGACCCCAGGTTGAGGAAAGTGGTTATTGATGATGATGGGAATCTCAGGATCTATAGCTTCTACCCTGAGCAGAATAACCAGTGGGTTGAGGTTTGGAAAGGGGTGTGGGAGATGTGCATAATCAAAGGTAAATGTGGGCCCAATGCTGTTTGTGTGCCCAGAGAGGATTTGAATACTTCTACTAATTGTGTTTGCCCATCTGGGTTTAACCCAAATCAAGGAGGGCCTGAAAATGGTTGCACAAGGAAAATCCCACTTTCCAAAAACACCCAATTTATCAGGCTGGATTATGTGAATTACACCAGTGATGGTAGCATGATTCAAATCGCTGCTGAAAACTTCACAATATGTGAGTCTAGCTGCAGATCAGACAAAACCTGTCTTGGATTTGGTTTCAAGTATGATGGAACAGGCTATTGTGTGTGGCTAAAGGGGACACAGCTTCAATATGGTCATTGGTCACCAGCCACTGAAACTGCGTTGTTTGTGAAAGTTGACCAATCTGAATCACAAGCTTCTAACTTCATTGGCATGACGGAGGTTATGCAAACCACATGTCCTGTGAACATAAGCCTGCCACTGCCTCCAAAGGATTCAAACACTACTGCAAGGAACATTGCCATAATCTGCACTCTCTTTGCTGCAGAACTCATTGCTGGGGTGGCATTCTTTTGGTCTTTCCTAAAGAGGTACATCAAGTATAGGGACATGGCCACCACACTAGGCCTTGAGCTTCTTCCTGCTGGTGGCCCCAAAAGGTTCACCTACTCGGAAATCAAAGCAGCAACCAATGACTTCTCCAACCTCATAGGGAGAGGAGGCTTTGGAGACGTCTACAAAGGGGAGTTACCAGATCACCGTGTGGTGGCAGTGAAGTGCCTCAAGAATGTCACAGGCGGTGATGCTGAGTTTTGGGCTGAGGTCACAATAATTGCCAGAATGCACCACCTCAACTTGGTGCGCTTGTGGGGCTTCTGTGCTGAGAAGGGCCGAAGGATACTTGTGTATGAGCACATCCCTGGTGGCTCATTGGACAAGTACTTCCCAAAAGGGAACATTCACAGCAACAACAACAAAAAGCCTGTTTTGGATTGGAACATGAGGTATAGAATTGCTCTAGGAGTGGCGAGGGCTATTGCATACTTGCATGAGGAGTGTTTGGAGTGGGTTTTGCACTGTGATATCAAGCCAGAGAACATTTTATTGGGTGATGATTTTTGTCCAAAGATATCAGATTTTGGGTTGGCTAAATTGAGAAAAAAGGAGGATATGGTCACCATGTCAAGGAGGAGGGGTACTCCTGGTTACATGGCTCCTGAATGGATCACTGCAGACCCAATTACTTCCAAGGCTGACGTGTATAGCTTCGGCATGGTGTTGTTGGAGCTTGTGAGTGGGATAAGGAACTTTGAGATCCAAGGATCTGTGGTCCGAAGTGAGGAGTGGTATTTCCCTGGCTGGGCTTTTGATAAGATGTTTAAGGAGATGAGAGTTGAAGACATTCTGGATAGTCAAATAAGGGATGTTTATGATAGCAGGGCCCATTTTGAGTTGGTTAATAGGATGGTCAAGACAGCAATGTGGTGCCTTCAGGATAGGCCTGAGTTGAGGCCCACTATGGGGAAAGTGGCTAAGATGATCGAAGGGACTGCGGAGATCACTGAGCCCAAAAAGCCCACTGTTTTCTTCCTCGGGGATGAGTAG 2337 0.4634 MALCTNTNAATTTIFFFFFLFNFQSSLSQLTSFNISHSPWLPTQNLTLLSPNKNFTAGFFSQPNSPNLFTFSVWFTKVPKSANPLIWTATPQVNTSGSLVITSKGELLLNGSSFPNASTATQLVLQNDGNLVFGNWSSFKNPTDTVLPNQNFSTMIELKSNNGKFKFINAQFLVLGSTSAQYYNTPSRLLSMDDQGKMSMDGSSFLTSDYGDPRLRKVVIDDDGNLRIYSFYPEQNNQWVEVWKGVWEMCIIKGKCGPNAVCVPREDLNTSTNCVCPSGFNPNQGGPENGCTRKIPLSKNTQFIRLDYVNYTSDGSMIQIAAENFTICESSCRSDKTCLGFGFKYDGTGYCVWLKGTQLQYGHWSPATETALFVKVDQSESQASNFIGMTEVMQTTCPVNISLPLPPKDSNTTARNIAIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKAATNDFSNLIGRGGFGDVYKGELPDHRVVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGRRILVYEHIPGGSLDKYFPKGNIHSNNNKKPVLDWNMRYRIALGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGIRNFEIQGSVVRSEEWYFPGWAFDKMFKEMRVEDILDSQIRDVYDSRAHFELVNRMVKTAMWCLQDRPELRPTMGKVAKMIEGTAEITEPKKPTVFFLGDE* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0073 778 Gene3D Phosphorylase Kinase; domain 1 449 549 - -
Apr7g0073 778 Pfam S-locus glycoprotein domain 210 283 IPR000858 GO:0048544
Apr7g0073 778 SMART blect_4 43 142 IPR001480 -
Apr7g0073 778 ProSitePatterns Protein kinases ATP-binding region signature. 481 503 IPR017441 GO:0005524
Apr7g0073 778 SUPERFAMILY Protein kinase-like (PK-like) 458 758 IPR011009 -
Apr7g0073 778 SMART serkin_6 475 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0073 778 ProSiteProfiles Protein kinase domain profile. 475 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0073 778 Pfam Protein kinase domain 479 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0073 778 Gene3D - 34 141 IPR036426 -
Apr7g0073 778 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 155 IPR036426 -
Apr7g0073 778 PIRSF SRK 4 778 IPR024171 GO:0004674
Apr7g0073 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Apr7g0073 778 PANTHER OS07G0415500 PROTEIN 15 778 - -
Apr7g0073 778 CDD STKc_IRAK 481 760 - -
Apr7g0073 778 Gene3D Transferase(Phosphotransferase) domain 1 550 771 - -
Apr7g0073 778 PANTHER OS10G0101000 PROTEIN 15 778 - -
Apr7g0073 778 ProSiteProfiles PAN/Apple domain profile. 291 377 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0073 Apr-Chr7 3027929 3030449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0073 309 770 Receptor kinase-like Gene Family AT4G18250 33.750 7.19e-79 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr7g0073 Pkinase 4.4e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0073 7 3027929 3030449 Apr7g0073 7 3027929 3030449 ECH