Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0071 ATGAGAGTAATGATGAAAACCCATCTGGGTATTGCTCTTTGCCTTGTGATGTTTCAGTGTGCATGGTCTCAGGATGATGGTGTTGTCATGAACATGCTCAAGAAGGGGATCAAAGCTCCCAGTGATCTTCAATGGACAGACCCAGATGTGTGTAAATGGGAACATGTTCAGTGCAATTCAATGAAGAGGGTCATTGCAATTCAAATTGGGATGTTGAGCCTTGAAGGTTCTTTGCCAAAGGAACTGGTGCAACTCTCAGAATTGACGCGTTTTGAGTGCATGAAAAATGGCCTAACAGGGCCATTCCCTTACATGCCAAAGTCCTTGCAGAGGCTTATCATCCATGACAACAATTTCAGCTCCATACCAAGTGATTTCTTCTCCACAATGACAAATTTGCAAGAGGTGAGAATTGACTACAACCCTTTCCCTCAGTGGGAGGTTCCTGCTAGCCTCAAGGACTGTGTGGCCCTTCAGATTTTCTCTGCAATTAGTACTGGTCTTGTTGGGACAATCCCAGATTTTTTGGGCAAAGATGGTCCCTTTCCAGGTTTAGTTTTCTTGGGCTTGTGTTTTAATTTTCTTGAAGGTGGCTTGCCTGCAACCTTTTCTGGAAGTTCCATAGAGAACCTTTTGGTGAATGGTCAGAAAAGTAACAATAAACTCAATGGTACTCTTGCTGTGTTACAGAACATGACATCTTTGAAGCAAATTTGGGCACATGGTAACTCATTCACGGGTCCTATACCCGACTTGTCGAGCCATGACCAACTGTTTGATGTGAGTTTGAGGGATAACCAATTGACTGGGGTTGTTCCACCCTCCCTCATTTCTCTTCCTGCTCTTACTGTTGTCAATTTGACAAATAACTATCTTCAAGGGTCCCCTCCCAAGTTCAAAGATGGGGTGAGAGTTGATGATGATTTGGAGAGGGGGATCAATAGGTTTTGCACAAAGGTGGCTGGCCAGCCATGTAGTCCCCTTGTGGATGCTTTACTTTCTGTTGTTGAACCTTTGGGTTACCCTTTACATCTTGCTGATAGTTGGCAGGGTAATGACCCTTGTGCTAAACAATGGATTGGGATTGTTTGCGCAGGTGGTAACATTTCAATTGTTAACTTTCAGAACATGGGTCTATCTGGCAAAATTTCCCCCAGTTTCGCAAGGCTTACATCTGTCACAAAGTTGCTTCTTGCTAACAATGGCCTTACTGGTACCGTACCAAGTGAACTCACTAGCATGCCTCTTTTGAAAGAGCTAGATGTTTCCAATAATAAATTGTATGGTAAGGTACCGTCTTTCCGTGGAGATGTGGTTCTCAAAACTGGTGGCAATCCTGATATAGGAAAGGATGAACCTCGAGCCCCACCTGGCTCAGATTCTGGGGGTGGTTCTAGAGGTGAAAGTAAGAAACATAGAACTGGAGCAATTGTTGGCACTGTGGTGGGGAGTGTCAGTTTACTTGGTATAGGGGCCCTGGTGTTTATTTATGGTAGAAAACATAAGCGTGGTGGAAAAGTCCAAAGTCCTAATACAATAGTTGTGCATCCTCGCCATTCTGGAGATGGAAATGCTGTGAAGATAAGTGTTGCGACTGCAGGTTCTGGTGTTGGTGGTGGTGGAGATGGAACCGGTGCGTTTAGTCCAACAACAAGTAGTGTTCATCATGTGGAAGCTGGTAATATGGTGATTTCAATTCAAGTTTTGAGAGAAGTCACAAACAATTTTAGTGAAGGAAACGTGTTGGGGAGGGGTGGTTTTGGCACTGTGTACCAAGGAGAATTGCATGATGGAACAAAGATTGCAGTGAAAAGGATGGAATCAGGATTGGCCGGTGAGAAGGGGCTGAGTGAGTTCAAATCTGAAATTGCAGTACTTACTAAGGTTAGACACAGGCATTTGGTTGCACTTCTTGGCCACTGCTTGGATGGAAATGAGAGGCTTCTCGTGTATGAATTCATGCCTCAAGGTCCTCTTAGTAAACATTTGTTTGACTGGAAGGAGGAAGGGGTACAACCACTGGAATGGAAGAGAAGGCTTTCCATTGCATTGGATGTTGCTAGAGGTGTTGAATATCTCCATGGTTTGGCACAACAAATTTTTATCCACAGGGATCTGAAGCCATCAAACATCTTGCTTGATGATGATATGCACGCTAAAGTTTCAGACTTTGGATTGGTTCGGCTCGCTCCGGAAGGACAAGCCTCGTTCGAGACCAGACTTGCTGGAACATTTGGATATTTGGCACCAGAGTATGCAGTGACCGGACGAGTTACTACAAAGGTTGATGTGTACAGCTACGGCGTGATTCTTATGGAGATGATAACAGGAAGAAGAGCAATTGACAACAGCCAACCAGAAGAGAATATCCACCTTGTGACATGGTTCCGCAGGATGCTACTGAACAAAGACTCATTTGGAAAGCTCATTGACCCCACAATTGATGTTGGAGATGAAGCCTTACCGAGCCTTAGGACTGTGGCAGAGTTGGCTGGCCACTGTTGTGCTAGGGAGCCTTACCAGAGGCCTGACATGGGTCATGTGGTGAATGTGTTGGCACCACTTGTTGAGATTTGGAAGCCTTCAGAACCAGATGGTGATGATTTATATGGCATTGACTTGGATATGACTTTGCCTCAAGCACTAAGTAAGTGGCAGGCTATTGAAGGAAAGGGCACCTTTGATATATCATCCTCTTCATCAATGCTTACTAGTGGAGATAATACACAGTCTAGCATACCAACTAGGCCTTCTGGATTTGCTGATTCCTTTACTTCTTCTGACGGAAGATGA 2793 0.4458 MRVMMKTHLGIALCLVMFQCAWSQDDGVVMNMLKKGIKAPSDLQWTDPDVCKWEHVQCNSMKRVIAIQIGMLSLEGSLPKELVQLSELTRFECMKNGLTGPFPYMPKSLQRLIIHDNNFSSIPSDFFSTMTNLQEVRIDYNPFPQWEVPASLKDCVALQIFSAISTGLVGTIPDFLGKDGPFPGLVFLGLCFNFLEGGLPATFSGSSIENLLVNGQKSNNKLNGTLAVLQNMTSLKQIWAHGNSFTGPIPDLSSHDQLFDVSLRDNQLTGVVPPSLISLPALTVVNLTNNYLQGSPPKFKDGVRVDDDLERGINRFCTKVAGQPCSPLVDALLSVVEPLGYPLHLADSWQGNDPCAKQWIGIVCAGGNISIVNFQNMGLSGKISPSFARLTSVTKLLLANNGLTGTVPSELTSMPLLKELDVSNNKLYGKVPSFRGDVVLKTGGNPDIGKDEPRAPPGSDSGGGSRGESKKHRTGAIVGTVVGSVSLLGIGALVFIYGRKHKRGGKVQSPNTIVVHPRHSGDGNAVKISVATAGSGVGGGGDGTGAFSPTTSSVHHVEAGNMVISIQVLREVTNNFSEGNVLGRGGFGTVYQGELHDGTKIAVKRMESGLAGEKGLSEFKSEIAVLTKVRHRHLVALLGHCLDGNERLLVYEFMPQGPLSKHLFDWKEEGVQPLEWKRRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLDDDMHAKVSDFGLVRLAPEGQASFETRLAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEMITGRRAIDNSQPEENIHLVTWFRRMLLNKDSFGKLIDPTIDVGDEALPSLRTVAELAGHCCAREPYQRPDMGHVVNVLAPLVEIWKPSEPDGDDLYGIDLDMTLPQALSKWQAIEGKGTFDISSSSSMLTSGDNTQSSIPTRPSGFADSFTSSDGR* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0071 930 SUPERFAMILY L domain-like 41 434 - -
Apr7g0071 930 Gene3D Transferase(Phosphotransferase) domain 1 654 863 - -
Apr7g0071 930 SMART serkin_6 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0071 930 Pfam Protein kinase domain 577 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0071 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Apr7g0071 930 Gene3D Ribonuclease Inhibitor 24 323 IPR032675 -
Apr7g0071 930 ProSiteProfiles Protein kinase domain profile. 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0071 930 CDD STKc_IRAK 582 855 - -
Apr7g0071 930 MobiDBLite consensus disorder prediction 898 930 - -
Apr7g0071 930 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Apr7g0071 930 Pfam Leucine rich repeat N-terminal domain 330 364 IPR013210 -
Apr7g0071 930 Pfam Leucine rich repeat N-terminal domain 24 59 IPR013210 -
Apr7g0071 930 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 7 930 - -
Apr7g0071 930 Gene3D Phosphorylase Kinase; domain 1 545 653 - -
Apr7g0071 930 MobiDBLite consensus disorder prediction 442 472 - -
Apr7g0071 930 Gene3D Ribonuclease Inhibitor 328 452 IPR032675 -
Apr7g0071 930 PANTHER OSJNBA0070M12.3 PROTEIN 7 930 - -
Apr7g0071 930 SUPERFAMILY Protein kinase-like (PK-like) 552 861 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0071 Apr-Chr7 2980324 2984623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0071 64 858 Receptor kinase-like Gene Family AT5G07280 30.888 6.95e-80 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Apr7g0071 Pkinase 5.2e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0071 7 2980324 2984623 Apr7g0071 7 2980324 2984623 ECH